Re: Dependency Parser model data

2015-03-24 Thread Ephi
Thanks! * 1 ** Regarding the documentation - the documentation for cTAKES 3.2 [1] links to the Dependency Parser documentation for 3.0 [2], it doesn't seem to have an updated documentation for this component. In the page from 3.0 it says simply that clinques.mod is the main ClearParser mo

Re: Dependency Parser model data

2015-03-24 Thread Ephi
Update: I tried loading the descriptor file via the menu File -> Open CPE Descriptor This throws the following exception due to the fact that the file ClearTrainerPosLemAggregate.xml is missing. From searching the internet it seems that this file had been included in cTAKES 2.0 but is not existe

Re: Medical de-identification

2015-03-24 Thread britt fitch
Regarding UIMA knowledge I think its helpful to run through the UIMA tutorial to get a feel for how pipelines are executed and get familiar with the process of building up annotations at each step and then doing something with the final result. Running through the tutorial will get you familiar

Re: Dependency Parser model data

2015-03-24 Thread Ephi
After some more research, it seems that you can run the CPE to train a model in version 2.0 of cTAKES but this doesn't work in cTAKES 3.2. Many files are missing, but more importantly it seems that the model format has changed. In version 2.0 the model format was the basic liblinear/libsvm format.