Re: intro video and ctakes youtube

2014-12-15 Thread Pei Chen
John, I presume you this thread: http://mail-archives.apache.org/mod_mbox/ctakes-dev/201408.mbox/%3c393252f14c42f946952f1ed75d316cad39158...@chexmbx4a.chboston.org%3E Strange, I couldn't find it anymore either... The place holder could have been auto deleted because it was empty? I think it's wor

RE: intro video and ctakes youtube : Youtube Apache cTakes Channel Direct Link

2014-12-15 Thread Finan, Sean
Hmmm, I can't find it in a search. However, here is a direct link: https://www.youtube.com/channel/UC8hQoOKz3v4PNEf6cqSkjbQ Maybe it needs a few videos to register in the search engine ? Sean -Original Message- From: Pei Chen [mailto:chen...@apache.org] Sent: Monday, December 15, 2014

RE: revamping the Apache cTAKES website

2014-12-15 Thread Chen, Pei
Check out a mockup of a new website proposal: http://svn.apache.org/repos/asf/ctakes/site/new/index.html Based off bootstrap (Idea borrowed from the Spark folks..). Couple of key pieces of info: - 10% of visitors are on mobile/tablets - The most currently visited pages are: downloads.cgi, gettings

RE: revamping the Apache cTAKES website

2014-12-15 Thread andy mcmurry
+1 !! Very nice On Dec 15, 2014 2:32 PM, "Chen, Pei" wrote: > Check out a mockup of a new website proposal: > http://svn.apache.org/repos/asf/ctakes/site/new/index.html > Based off bootstrap (Idea borrowed from the Spark folks..). > > Couple of key pieces of info: > - 10% of visitors are on mobil

Problem running cTakes-clinical pipeline --> AggregatePlaintextFastUMLSProcessor.xml

2014-12-15 Thread Liang, Yu
Hi Yu, I think this is a current limitation in cTAKES. I think it has to do with negation not detecting if the line breaks are separating the sentences. Would you mind forwarding the example to dev@ctakes.apache.org? I think Tim and others may be working on this

RE: revamping the Apache cTAKES website

2014-12-15 Thread Finan, Sean
Wow, I've just spent the last 2 hours doing the exact same thing. That is what I get for missing a meeting. Mine is extremely similar, though slightly different language (and without the "improved performance" bar chart - which may not belong). I also put the "Examples" in a big green button

RE: revamping the Apache cTAKES website

2014-12-15 Thread Finan, Sean
Anyway, a pretty amazing fresh start, thanks Pei -Original Message- From: Chen, Pei [mailto:pei.c...@childrens.harvard.edu] Sent: Monday, December 15, 2014 4:33 PM To: dev@ctakes.apache.org Subject: RE: revamping the Apache cTAKES website Check out a mockup of a new website proposal: htt

RE: Problem running cTakes-clinical pipeline --> AggregatePlaintextFastUMLSProcessor.xml

2014-12-15 Thread Finan, Sean
Hi Yu, > Also do you know is there any command line I can run to annotate like a > thousand files automatically rather than copy and paster. You could try the CPE gui : bin/runctakesCPE.sh Sean From: Liang, Yu [mailto:yu.li...@nyumc.org] Sent: Monday, December 15, 2014 4:51 PM To: dev@ctakes.a

RE: revamping the Apache cTAKES website

2014-12-15 Thread Savova, Guergana
Very nice, Pei, thank you!!! For now, don't pay too much attention to the content and images, they are just placeholders, working on them. --guergana -Original Message- From: Finan, Sean [mailto:sean.fi...@childrens.harvard.edu] Sent: Monday, December 15, 2014 5:03 PM To: dev@ctakes.apa

Re: revamping the Apache cTAKES website

2014-12-15 Thread Murali
Looks great. +1 > On Dec 15, 2014, at 4:29 PM, Chen, Pei wrote: > > Check out a mockup of a new website proposal: > http://svn.apache.org/repos/asf/ctakes/site/new/index.html > Based off bootstrap (Idea borrowed from the Spark folks..). > > Couple of key pieces of info: > - 10% of visitors ar

Re: revamping the Apache cTAKES website

2014-12-15 Thread jay vyas
this is gorgeous ! Thanks pei ! i let the bigtop folks know as well ! On Mon, Dec 15, 2014 at 6:21 PM, Murali wrote: > > Looks great. +1 > > > > > On Dec 15, 2014, at 4:29 PM, Chen, Pei > wrote: > > > > Check out a mockup of a new website proposal: > > http://svn.apache.org/repos/asf/ct

Re: revamping the Apache cTAKES website

2014-12-15 Thread Pei Chen
the template was "borrowed" from spark... we should put in our own design/css/layout/skin to suit our needs. Perhaps Michelle or others familiar with bootstrap could help us out here? On Mon, Dec 15, 2014 at 7:32 PM, jay vyas wrote: > > this is gorgeous ! Thanks pei ! i let the bigtop folks kno

UMLS Integration

2014-12-15 Thread Jay_Ram
Hi All, I downloaded UMLS resource, to use them offline by loading in mysql. I followed them which are mentioned to load data into mysql. But I am unable to do it show error Loading MetamorphoSys ... [Please be patient and wait for MetamorphoSys to

RE: UMLS Integration

2014-12-15 Thread Finan, Sean
Hi Praveen, I think that this question might be better aimed at the nlm umls community. The standard cTakes installation does not follow this workflow. Sean -Original Message- From: Jay_Ram [mailto:pandupraveen...@gmail.com] Sent: Tuesday, December 16, 2014 12:10 AM To: dev@ctakes.apa