Re: v_snomed_fword_lookup view

2014-08-11 Thread Clayton Turner
Hi again: How exactly do you switch to using the cTakes dictionary-lookup-fast. Do I need to go in and alter xml files or is it as simple as adding a certain item to the list of analysis engines? On Fri, Aug 8, 2014 at 3:48 PM, Finan, Sean < sean.fi...@childrens.harvard.edu> wrote: > Hi Clayton

Re: v_snomed_fword_lookup view

2014-08-11 Thread Clayton Turner
When navigating to ctakes-dictionary-lookup-fast\desc\analysis_engine there are 2 files, assumedly analysis engines. SnomedLookupAnnotator.xml and SnomedOvLookupAnnotator.xml If I pick either, I put in my UMLS information but receive an error when trying to run the CPE: Initialization of CAS Pro

Re: v_snomed_fword_lookup view

2014-08-11 Thread Clayton Turner
I'm going to do a clean install through the repo rather than the binaries and see if that fixes my issue because I think I just read a past post saying the lookup2 folders exist there. On Mon, Aug 11, 2014 at 11:52 AM, Clayton Turner wrote: > When navigating to ctakes-dictionary-lookup-fast\des

Re: v_snomed_fword_lookup view

2014-08-11 Thread Clayton Turner
I still get the same error with the ctakes3.2 branch. Any suggestions? On Mon, Aug 11, 2014 at 12:06 PM, Clayton Turner wrote: > I'm going to do a clean install through the repo rather than the binaries > and see if that fixes my issue because I think I just read a past post > saying the lookup

RE: v_snomed_fword_lookup view

2014-08-11 Thread Finan, Sean
Hi Clay, It has been a hectic day and I apologize for the late reply. > Now, I don't even have a "lookup2" folder and, subsequently the Tui folder and > cTakesSnomed.xml file. This seems to be the problem, but I'm not sure where > these files are supposed to be grabbed from. I think that all dire

Re: v_snomed_fword_lookup view

2014-08-11 Thread Harpreet Khanduja
Hello Clayton, I do not know about ytex, but I did switch from dictionary-lookup to dictionary-lookup-fast. I update my ctakes-dictionary-lookup-fast project using maven. I think I used Team- Update and switched to the latest revision available and then I downloaded new 3.2 resources from t

RE: v_snomed_fword_lookup view

2014-08-11 Thread Finan, Sean
Thanks Harpreet, That is definitely necessary to build! Those lines should already be in the pom, but commented out. I think that some version/branching issues may have arisen at some point wrt this module ... If somebody beats me to it then cheers, otherwise I will try to check out tonight an

Re: v_snomed_fword_lookup view

2014-08-11 Thread Harpreet Khanduja
Yes, absolutely and no problem at all. Regards, Harpreet On Mon, Aug 11, 2014 at 1:16 PM, Finan, Sean < sean.fi...@childrens.harvard.edu> wrote: > Thanks Harpreet, > That is definitely necessary to build! > > Those lines should already be in the pom, but commented out. I think that > some vers