Re: Missing Medication Frequency and Allergy attributes from MedicationMention

2020-06-06 Thread Peter Abramowitsch
Hi Honey I am using the anatomical site mention in my pipeline, but at the moment, the results are extremely poor. To be honest though, I have not had time to see how it is implemented. The results fall into three categories missing 2cm lesion on left foot result (null) obviouship fra

Re: Missing Medication Frequency and Allergy attributes from MedicationMention [EXTERNAL]

2020-06-06 Thread Miller, Timothy
ey gandhi Sent: Saturday, June 6, 2020 2:53 AM To: dev@ctakes.apache.org Subject: Re: Missing Medication Frequency and Allergy attributes from MedicationMention [EXTERNAL] * External Email - Caution * Is there any other way to find relationship between medication and its dose/route/frequ

Re: Missing Medication Frequency and Allergy attributes from MedicationMention

2020-06-05 Thread Honey gandhi
Is there any other way to find relationship between medication and its dose/route/frequency or between anatomical site and its sign symptoms? Thanks, Honey G. > On 06-Jun-2020, at 12:09 PM, Peter Abramowitsch > wrote: > > Some granular areas are unfinished in cTakes and in these cases, attri

Re: Missing Medication Frequency and Allergy attributes from MedicationMention

2020-06-05 Thread Peter Abramowitsch
Some granular areas are unfinished in cTakes and in these cases, attributes mentioned are just placeholders for functionality that needs to be filled in. I can't speak specifically to Medication Freq/Dose/Route, but much work is left to be done and contributed throughout the system. Bodysite is

Re: Missing Medication Frequency and Allergy attributes from MedicationMention

2020-06-05 Thread Honey gandhi
Hi Rajan, I am running full.piper file only. Yet I don’t get the desired results. I have also tried adding relationsubpipe.piper to my full.piper file, yet no relations are extracted. Even modified my cui response class to include medicationMention specific attributes but they all come as null

Re: Missing Medication Frequency and Allergy attributes from MedicationMention

2020-06-05 Thread gandhi rajan
Hi Honey, As far as I remember, there are two options in invocation of ctakes Rest Api. The default one run through the basic pipers but the full option may probably run through all the pipers which you are looking for. Please check this out. On Friday, June 5, 2020, Honey gandhi wrote: > Hi > >