RE: ctakes with icd10; 2015 versions available on sourceforge!

2015-12-10 Thread Finan, Sean
gt; > Sean > > > > -Original Message- > From: Alaa al Barari [mailto:alaa.albar...@gmail.com] > Sent: Thursday, December 10, 2015 10:38 AM > To: dev@ctakes.apache.org > Subject: Re: ctakes with icd10; 2015 versions available on sourceforge! > > Hi Finan

Re: ctakes with icd10; 2015 versions available on sourceforge!

2015-12-10 Thread Alaa al Barari
; wrote: > > > >> Thank, but what I endup with is > >> wrong ? > >> On Dec 10, 2015 4:26 AM, "Finan, Sean" > >> > >> wrote: > >> > >>> Hi Alaa, > >>> > >>> If you downloaded the 2015 .property a

RE: ctakes with icd10; 2015 versions available on sourceforge!

2015-12-10 Thread Finan, Sean
official tool or part of the ctakes release. Sean -Original Message- From: Alaa al Barari [mailto:alaa.albar...@gmail.com] Sent: Thursday, December 10, 2015 10:38 AM To: dev@ctakes.apache.org Subject: Re: ctakes with icd10; 2015 versions available on sourceforge! Hi Finan, I am sorr

Re: ctakes with icd10; 2015 versions available on sourceforge!

2015-12-10 Thread Alaa al Barari
eady to use. >>> >>> Sean >>> >>> >>> -Original Message----- >>> From: Alaa al Barari [mailto:alaa.albar...@gmail.com] >>> Sent: Wednesday, December 09, 2015 6:33 PM >>> To: dev@ctakes.apache.org >>> Sub

RE: ctakes with icd10; 2015 versions available on sourceforge!

2015-12-10 Thread Geise, Brandon D.
es are >> already populated and ready to use. >> >> Sean >> >> >> -Original Message- >> From: Alaa al Barari [mailto:alaa.albar...@gmail.com] >> Sent: Wednesday, December 09, 2015 6:33 PM >> To: dev@ctakes.apache.org >> Subject: Re: cta

Re: ctakes with icd10; 2015 versions available on sourceforge!

2015-12-10 Thread Alaa al Barari
already >> populated and ready to use. >> >> Sean >> >> >> -Original Message- >> From: Alaa al Barari [mailto:alaa.albar...@gmail.com] >> Sent: Wednesday, December 09, 2015 6:33 PM >> To: dev@ctakes.apache.org >> Subject: Re: ctakes with icd10; 2015

RE: ctakes with icd10; 2015 versions available on sourceforge!

2015-12-09 Thread Alaa al Barari
nd ready to use. > > Sean > > > -Original Message- > From: Alaa al Barari [mailto:alaa.albar...@gmail.com] > Sent: Wednesday, December 09, 2015 6:33 PM > To: dev@ctakes.apache.org > Subject: Re: ctakes with icd10; 2015 versions available on sourceforge! > > so basically l

RE: ctakes with icd10; 2015 versions available on sourceforge!

2015-12-09 Thread Finan, Sean
09, 2015 6:33 PM To: dev@ctakes.apache.org Subject: Re: ctakes with icd10; 2015 versions available on sourceforge! so basically looks like the path had Desktop as capital thats why it did not work. I ended up having rows like this inside ctakesicd2015.scripts : INSERT INTO CUI_TERMS VALUES

Re: ctakes with icd10; 2015 versions available on sourceforge!

2015-12-09 Thread Alaa al Barari
re open discussion/open development.) >> --Pei >> >> On Tue, Dec 8, 2015 at 10:36 PM, Geise, Brandon D. >> wrote: >> > I'd be interested in contributing to making the dictionary tool more >> user friendly with a GUI. >> > >> > Thanks, >>

Re: ctakes with icd10; 2015 versions available on sourceforge!

2015-12-09 Thread Alaa al Barari
t; > > Thanks, > > Brandon > > > > -Original Message- > > From: Finan, Sean [mailto:sean.fi...@childrens.harvard.edu] > > Sent: Tuesday, December 08, 2015 6:12 PM > > To: dev@ctakes.apache.org > > Subject: RE: ctakes with icd10; 2015 versions availabl

Re: ctakes with icd10; 2015 versions available on sourceforge!

2015-12-08 Thread Pei Chen
> > Thanks, > Brandon > > -Original Message- > From: Finan, Sean [mailto:sean.fi...@childrens.harvard.edu] > Sent: Tuesday, December 08, 2015 6:12 PM > To: dev@ctakes.apache.org > Subject: RE: ctakes with icd10; 2015 versions available on sourceforge! > > Hi D

RE: ctakes with icd10; 2015 versions available on sourceforge!

2015-12-08 Thread Finan, Sean
6:12 PM To: dev@ctakes.apache.org Subject: RE: ctakes with icd10; 2015 versions available on sourceforge! Hi Dave, I'm always happy to see interest in our stuff! >Step 1 I built the tool to be able to build a dictionary using anything in the umls - snomed, icd9, hpo, etc. so using the ve

RE: ctakes with icd10; 2015 versions available on sourceforge!

2015-12-08 Thread Geise, Brandon D.
with icd10; 2015 versions available on sourceforge! Hi Dave, I'm always happy to see interest in our stuff! >Step 1 I built the tool to be able to build a dictionary using anything in the umls - snomed, icd9, hpo, etc. so using the veterinary extension shouldn't be a problem. You

RE: ctakes with icd10; 2015 versions available on sourceforge!

2015-12-08 Thread Finan, Sean
but I hope that it helps. Must run, Sean -Original Message- From: Alaa al Barari [mailto:alaa.albar...@gmail.com] Sent: Tuesday, December 08, 2015 6:49 PM To: dev@ctakes.apache.org Subject: Re: ctakes with icd10; 2015 versions available on sourceforge! Thank you very very much Finan, I am

Re: ctakes with icd10; 2015 versions available on sourceforge!

2015-12-08 Thread Alaa al Barari
m: David Kincaid [mailto:kincaid.d...@gmail.com] > Sent: Tuesday, December 08, 2015 4:57 PM > To: dev@ctakes.apache.org > Subject: Re: ctakes with icd10; 2015 versions available on sourceforge! > > Thanks, Sean! It's great that cTAKES may soon have an up to date database > out o

RE: ctakes with icd10; 2015 versions available on sourceforge!

2015-12-08 Thread Finan, Sean
pre-built version in sandbox. Someday, after the rainbow, maybe I'll get a chance to do that ... Sean -Original Message- From: David Kincaid [mailto:kincaid.d...@gmail.com] Sent: Tuesday, December 08, 2015 4:57 PM To: dev@ctakes.apache.org Subject: Re: ctakes with icd10; 2015 vers

Re: ctakes with icd10; 2015 versions available on sourceforge!

2015-12-08 Thread Geise, Brandon D.
the instructions aren't clear. They seemed to make sense when I wrote them at the time. Hope that helps, Brandon _ From: David Kincaid mailto:kincaid.d...@gmail.com>> Sent: Tuesday, December 8, 2015 4:57 PM Subject: Re: ctakes with icd10; 2015 versions a

Re: ctakes with icd10; 2015 versions available on sourceforge!

2015-12-08 Thread David Kincaid
Thanks, Sean! It's great that cTAKES may soon have an up to date database out of the box. Hopefully it will cut down on the need for many to build their own DB's. Thank you much for doing that. Unfortunately, I still will need to build a custom one for us. I work in veterinary medicine so I need t

RE: ctakes with icd10; 2015 versions available on sourceforge!

2015-12-08 Thread Finan, Sean
Hi Brandon, thanks for finding and forwarding the instructions! I have checked in two new hsqldb dictionaries, both from the 2015AB version of the UMLS. They both have codes for snomedct_us, rxnorm, icd9cm and icd10pcs - as well as the usual cui, tui, preferred term mappings. One uses cuis fil