Re: CUI Question [EXTERNAL]

2023-02-02 Thread Finan, Sean
) { final String path = documentPath.getDocumentPath(); if ( path != null && !path.isEmpty() ) { return path; } } return ""; } Sean From: JOHN R CASKEY Sent: Thursday, February 2, 2023 4:44 PM To:

Re: CUI Question [EXTERNAL]

2023-02-02 Thread JOHN R CASKEY
(jCas).toString()); But this throws org.apache.uima.cas.CASRuntimeException: No sofaFS with name UriView found Thanks again, John From: Finan, Sean Date: Thursday, February 2, 2023 at 1:53 PM To: dev@ctakes.apache.org Subject: Re: CUI Question [EXTERNAL] Hi John, Each annotation gets a unique

Re: CUI Question [EXTERNAL]

2023-02-02 Thread JOHN R CASKEY
Awesome, thank you very much! From: Finan, Sean Date: Thursday, February 2, 2023 at 1:53 PM To: dev@ctakes.apache.org Subject: Re: CUI Question [EXTERNAL] Hi John, Each annotation gets a unique concept for every combination of possible codes, semantic types, etc. You have pasted a good

Re: CUI Question [EXTERNAL]

2023-02-02 Thread Finan, Sean
g the xmi files is probably not the best way to get information. Sean From: JOHN R CASKEY Sent: Thursday, February 2, 2023 1:58 PM To: dev@ctakes.apache.org Subject: CUI Question [EXTERNAL] * External Email - Caution * Hello, I’ve run into a problem and a question when running cTAKES. If I

CUI Question

2023-02-02 Thread JOHN R CASKEY
Hello, I’ve run into a problem and a question when running cTAKES. If I have a document and process it through cTAKES, then the XMI output will contain numerous XML tags. The tags our lab is interested in are the CUIs, for example, the XMI tag Would indicate the CUI C0025859 for Metoprolol-co