I'm also interested in showing BRAT annotations and might be able to spare a
few cycles towards that goal.
BioNLP has a really nice display of BRAT for the Cancer shared task
http://2013.bionlp-st.org/tasks/cancer-genetics
On Feb 11, 2014, at 6:06 AM, Jörn Kottmann wrote:
> On 02/07/2014 0
"Eating your own dog food"
I've bundled a NLP appliance containing UMLS and cTAKES and I'm migrating
services to the AWS cloud.
Throughout this process I have extensively documented the steps and I made a VM
target for Ubuntu 13.04.
I would have used the iDASH appliance but it is no longer m
Even though the resources dont need updating, the version mismatch is confusing
for anyone who wouldn't know that.
http://ctakes.apache.org/downloads.cgi
apache-ctakes-3.1.1-bin.tar.gz
ctakes-resources-3.1.0.zip
Was this intentional?
On Dec 10, 2013, at 8:46 AM, "Masanz, James J." wrote:
Most Open Source frameworks come with an "project-examples.zip" folder.
I can't help but think that the Groovy parser code and ctakes-gui make
excellent EXAMPLES for potential users.
https://svn.apache.org/repos/asf/ctakes/sandbox/
Imagine if each ctakes-component had an example Groovy script
ally for
> targeting future releases and making sure we get the things done we say we
> will. Unless there is any way this dramatically violates some convention I
> don't see why not!
> Tim
>
> On 12/04/2013 03:11 PM, Andrew McMurry wrote:
>> Hi all
>> I'll have
Hi all
I'll have an update about the VM situation shortly (positive news) but in the
meantime I propose a new issue type in JIRA: doc.
The ctakes docs are very good, and James deserves a lot of credit.
User docs are as important as code, sometimes even more so.
It is therefore appropriat
Hi all
I'll have an update about the VM situation shortly (positive news) but in the
meantime I propose a new issue type in JIRA: doc.
The ctakes docs are very good, and James deserves a lot of credit.
User docs are as important as code, sometimes even more so.
It is therefore appropriat
+1
On Nov 29, 2013, at 11:52 AM, "Masanz, James J." wrote:
>
> Hi all,
>
> This is a call for a vote on releasing the following candidate (rc2) as
> Apache cTAKES 3.1.1.
> This release includes mainly fixes to 3.1.0. It also includes CTAKES-257 -
> utilities to turn dependency graphs into
+1 on this direction
AND having this as an "out of the box" option upon download is even better.
--andy
On Nov 26, 2013, at 2:13 PM, "Chen, Pei" wrote:
> Tim had a good end user use case:
> I just want to use the ctakes constituency parser and output the tree text to
> console.
> So I was
e? Just curious.
>
>
> -Original Message-
> From: dev-return-2201-Masanz.James=mayo@ctakes.apache.org
> [mailto:dev-return-2201-Masanz.James=mayo@ctakes.apache.org] On Behalf Of
> Andrew McMurry
> Sent: Monday, November 11, 2013 6:54 PM
> To: dev@ctakes.apache.org
10AM Pacific Time I am meeting with iDASH about their future plans for the VM.
As a reminder, iDASH is an "NLP VM" for biomedical apps including ctakes. IDASH
has since fallen out of date.
** Does anyone have any specific questions about iDASH they would like me to
bring back? **
>> I will be
; be-- run the CPE via command line with default input/output directories or
> running a Driver Main Class as part of examples.
>
> --Pei
>
>> -Original Message-
>> From: Andrew McMurry [mailto:mcmurry.a...@gmail.com]
>> Sent: Tuesday, October 29, 2013 5:41
James:
EXCELLENT suggestion.
Last time I checked CTAKES was way out of date.
Makes sense that one of us should play "red rover" and keep cTakes up to date.
I just this moment sent a message to iDASH to start the update conversation.
--Andy
On Oct 30, 2013, at 8:04 AM, "Masanz, James J.
In my opinion, this user request is totally reasonable.
Download time aside, it should take NO LONGER THAN 15 MINUTES to get started
with cTakes.
True, cTakes is massively powerful and UMLS is a license headache. Nonetheless!
This keeps coming up, we should strongly consider an improved VM di
14 matches
Mail list logo
