Hello
You say "It is expected to use UCX as the transport layer under openmpi
and mpich". It is actually optional, OpenMPI works fine without UCX on
non-Mellanox networks. Worse, UCX says it supports some networks such as
OPA while its actual performance is very bad, people have to uninstall
UCX i
Hi,
I've been told UCX is now the default, for openmpi 4.0*
See: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=962180
Is there some performance work to point to ?
Regards
Alastair
On 11/06/2020 10:14, Brice Goglin wrote:
> Hello
>
> You say "It is expected to use UCX as the transport lay
Your message dated Thu, 11 Jun 2020 10:00:42 +
with message-id
and subject line Bug#958309: fixed in r-bioc-bioccheck 1.22.0+dfsg-1
has caused the Debian Bug report #958309,
regarding ITP: r-bioc-bioccheck -- Bioconductor-specific package checks
to be marked as done.
This means that you claim
Your message dated Thu, 11 Jun 2020 10:00:44 +
with message-id
and subject line Bug#958962: fixed in r-cran-goplot 1.0.2-1
has caused the Debian Bug report #958962,
regarding ITP: r-cran-goplot -- Visualization of Functional Analysis Data
to be marked as done.
This means that you claim that t
Your message dated Thu, 11 Jun 2020 10:00:43 +
with message-id
and subject line Bug#958967: fixed in r-bioc-dexseq 1.32.0+dfsg-1
has caused the Debian Bug report #958967,
regarding ITP: r-bioc-dexseq -- Inference of differential exon usage in RNA-Seq
to be marked as done.
This means that you
Your message dated Thu, 11 Jun 2020 10:00:44 +
with message-id
and subject line Bug#960375: fixed in r-cran-rstatix 0.5.0-1
has caused the Debian Bug report #960375,
regarding ITP: r-cran-rstatix -- Pipe-Friendly Framework for Basic Statistical
Tests
to be marked as done.
This means that you
Your message dated Thu, 11 Jun 2020 10:00:08 +
with message-id
and subject line Bug#950566: fixed in cgreen 1.2.0-1
has caused the Debian Bug report #950566,
regarding ITP: cgreen -- A modern unit test and mocking
to be marked as done.
This means that you claim that the problem has been dealt
Your message dated Thu, 11 Jun 2020 10:00:43 +
with message-id
and subject line Bug#961786: fixed in r-cran-coarsedatatools 0.6-5-1
has caused the Debian Bug report #961786,
regarding ITP: r-cran-coarsedatatools -- GNU R analysis of coarsely observed
data
to be marked as done.
This means tha
Your message dated Thu, 11 Jun 2020 10:00:43 +
with message-id
and subject line Bug#961787: fixed in r-cran-aweek 1.0.1-1
has caused the Debian Bug report #961787,
regarding ITP: r-cran-aweek -- GNU R convert dates to arbitrary week definitions
to be marked as done.
This means that you claim
Hi,
> This is the infamous left-pad package used to left-pad strings.
> The project is archived and this tool is now deprecated. The recommendation
> is to use String.prototype.padStart() instead. However, due to the
> ubiquity of this package in other node projects it is useful to have this
> p
Your message dated Thu, 11 Jun 2020 11:00:13 +
with message-id
and subject line Bug#962361: fixed in r-cran-tmvnsim 1.0-2-1
has caused the Debian Bug report #962361,
regarding ITP: r-cran-tmvnsim -- GNU R package for truncated multivariate
normal simulation
to be marked as done.
This means t
Your message dated Thu, 11 Jun 2020 11:00:13 +
with message-id
and subject line Bug#961788: fixed in r-cran-incidence 1.7.1-1
has caused the Debian Bug report #961788,
regarding ITP: r-cran-incidence -- GNU R compute, handle, plot and model
incidence of dated events
to be marked as done.
Thi
Your message dated Thu, 11 Jun 2020 11:00:12 +
with message-id
and subject line Bug#961790: fixed in r-cran-epiestim 2.2-1+dfsg-1
has caused the Debian Bug report #961790,
regarding ITP: r-cran-epiestim -- GNU R estimate time varying reproduction
numbers from rpidemic curves
to be marked as d
Package: wnpp
Severity: wishlist
Owner: Hideki Yamane
* Package name: ruby-async-io
Version : 1.30.0
Upstream Author : Samuel G. D. Williams
* URL : https://github.com/socketry/async-io
* License : MIT
Programming Lang: Ruby
Description : Provides supp
Package: wnpp
Severity: wishlist
Subject: ITP: r-bioc-rsubread -- Subread Sequence Alignment and Counting for R
Package: wnpp
Owner: Steffen Moeller
Severity: wishlist
* Package name: r-bioc-rsubread
Version : 2.2.2
Upstream Author : Wei Shi
* URL : https://bioconduc
Package: wnpp
Severity: wishlist
Subject: ITP: r-bioc-grohmm -- GRO-seq Analysis Pipeline
Package: wnpp
Owner: Steffen Moeller
Severity: wishlist
* Package name: r-bioc-grohmm
Version : 1.22.0
Upstream Author : Charles G. Danko, Minho Chae, Andre Martins, W. Lee Kraus
* URL
Processing commands for cont...@bugs.debian.org:
> owner 962657 Steffen Moeller
Bug #962657 [wnpp] ITP: r-bioc-rsubread -- Subread Sequence Alignment and
Counting for R
Owner recorded as Steffen Moeller .
>
End of message, stopping processing here.
Please contact me if you need assistance.
--
Package: wnpp
Severity: wishlist
Owner: Jérémy Lal
* Package name: node-addon-api
Version : 3.0.0
Upstream Author : Node.js API collaborators
* URL : https://github.com/nodejs/node-addon-api
* License : Expat
Programming Lang: C++
Description : Headers
Processing commands for cont...@bugs.debian.org:
> owner 962661 Steffen Moeller
Bug #962661 [wnpp] ITP: r-bioc-grohmm -- GRO-seq Analysis Pipeline
Owner recorded as Steffen Moeller .
>
End of message, stopping processing here.
Please contact me if you need assistance.
--
962661: https://bugs.de
Your message dated Thu, 11 Jun 2020 15:10:17 +
with message-id
and subject line Bug#958711: fixed in python-nanoget 1.12.1-1
has caused the Debian Bug report #958711,
regarding ITP: python-nanoget -- extract information from Oxford Nanopore
sequencing data and alignments
to be marked as done.
Your message dated Thu, 11 Jun 2020 15:10:18 +
with message-id
and subject line Bug#955133: fixed in sublime-music 0.9.1-1
has caused the Debian Bug report #955133,
regarding ITP: sublime-music -- native GTK *sonic client
to be marked as done.
This means that you claim that the problem has be
Your message dated Thu, 11 Jun 2020 15:10:17 +
with message-id
and subject line Bug#956111: fixed in python-ara 1.3.2-1
has caused the Debian Bug report #956111,
regarding ITP: python-ara -- ARA Records Ansible
to be marked as done.
This means that you claim that the problem has been dealt wi
Your message dated Thu, 11 Jun 2020 15:10:15 +
with message-id
and subject line Bug#958176: fixed in pos-tip 0.4.6+git20191227-1
has caused the Debian Bug report #958176,
regarding ITP: elpa-pos-tip -- emacs library to provide enhanced tooltips
to be marked as done.
This means that you claim
Your message dated Thu, 11 Jun 2020 15:10:18 +
with message-id
and subject line Bug#958951: fixed in python-pauvre 0.2.1-1
has caused the Debian Bug report #958951,
regarding ITP: python-pauvre -- QC and genome browser plotting Oxford Nanopore
and PacBio long reads
to be marked as done.
This
Your message dated Thu, 11 Jun 2020 15:10:14 +
with message-id
and subject line Bug#896975: fixed in node-client-sessions 0.8.0-1
has caused the Debian Bug report #896975,
regarding ITP: node-client-sessions -- connect middleware that implements
sessions in encrypted tamper-free cookies
to be
Your message dated Thu, 11 Jun 2020 15:10:12 +
with message-id
and subject line Bug#933323: fixed in elpa-transient 0.2.0-1
has caused the Debian Bug report #933323,
regarding ITP: transient -- emacs key and popup interface for complex
keybindings
to be marked as done.
This means that you cl
Your message dated Thu, 11 Jun 2020 15:10:12 +
with message-id
and subject line Bug#959912: fixed in droidlysis 3.1.0-1
has caused the Debian Bug report #959912,
regarding ITP: droidlysis -- Property extractor for Android apps
to be marked as done.
This means that you claim that the problem h
Your message dated Thu, 11 Jun 2020 15:10:10 +
with message-id
and subject line Bug#958702: fixed in bashtop 0.8.5-1
has caused the Debian Bug report #958702,
regarding ITP: bashtop -- Resource monitor that shows usage and stats
to be marked as done.
This means that you claim that the problem
Your message dated Thu, 11 Jun 2020 15:10:13 +
with message-id
and subject line Bug#962082: fixed in escapevelocity-java 0.9.1-1~exp1
has caused the Debian Bug report #962082,
regarding ITP: escapevelocity-java -- A subset reimplementation of Apache
Velocity with a much simpler API.
to be mar
Your message dated Thu, 11 Jun 2020 15:10:15 +
with message-id
and subject line Bug#958648: fixed in opensmtpd-filter-rspamd 0.1.6-1
has caused the Debian Bug report #958648,
regarding ITP: opensmtpd-filter-rspamd -- OpenSMTPD filter integration for the
Rspamd daemon
to be marked as done.
Th
Your message dated Thu, 11 Jun 2020 15:10:11 +
with message-id
and subject line Bug#958806: fixed in cmake-format 0.6.10-1
has caused the Debian Bug report #958806,
regarding ITP: cmake-format -- source code formatter for cmake listfiles
to be marked as done.
This means that you claim that th
Your message dated Thu, 11 Jun 2020 15:10:13 +
with message-id
and subject line Bug#962557: fixed in iitii 0.0+git20191030.85209e0-1
has caused the Debian Bug report #962557,
regarding ITP: iitii -- Implicit Interval Tree with Interpolation Index
to be marked as done.
This means that you clai
Your message dated Thu, 11 Jun 2020 15:10:14 +
with message-id
and subject line Bug#961319: fixed in ncbi-acc-download 0.2.6-1
has caused the Debian Bug report #961319,
regarding ITP: ncbi-acc-download -- Download genome files from NCBI by accession
to be marked as done.
This means that you c
Your message dated Thu, 11 Jun 2020 15:10:16 +
with message-id
and subject line Bug#960744: fixed in python-aioinflux 0.9.0-1
has caused the Debian Bug report #960744,
regarding ITP: python-aioinflux -- Asynchronous Python client for InfluxDB
to be marked as done.
This means that you claim th
Your message dated Thu, 11 Jun 2020 15:10:17 +
with message-id
and subject line Bug#962418: fixed in python-email-validator 1.1.1-1
has caused the Debian Bug report #962418,
regarding ITP: python-email-validator -- Robust email address syntax and
deliverability validation library
to be marked
Your message dated Thu, 11 Jun 2020 15:10:11 +
with message-id
and subject line Bug#962580: fixed in cif2cell 2.0.0a1+dfsg-1
has caused the Debian Bug report #962580,
regarding ITP: cif2cell -- prepare CIF files for electronic structure
calculations
to be marked as done.
This means that you
Your message dated Thu, 11 Jun 2020 15:10:14 +
with message-id
and subject line Bug#962315: fixed in libmmap-allocator 0.4.0-1
has caused the Debian Bug report #962315,
regarding ITP: libmmap-allocator -- STL allocator that mmaps files
to be marked as done.
This means that you claim that the
Your message dated Thu, 11 Jun 2020 15:10:10 +
with message-id
and subject line Bug#962599: fixed in adaptive-wrap 0.7-1
has caused the Debian Bug report #962599,
regarding ITP: adaptive-wrap-el -- smart line-wrapping with wrap-prefix
to be marked as done.
This means that you claim that the p
Your message dated Thu, 11 Jun 2020 15:10:16 +
with message-id
and subject line Bug#961685: fixed in python-aiohttp-proxy 0.1.1+dfsg-1
has caused the Debian Bug report #961685,
regarding ITP: python-aiohttp-proxy -- full-featured proxy connector for aiohttp
to be marked as done.
This means th
Your message dated Thu, 11 Jun 2020 15:10:13 +
with message-id
and subject line Bug#962233: fixed in libatomicbitvector
0.0+git20200519.e295358-1
has caused the Debian Bug report #962233,
regarding ITP: libatomicbitvector -- atomic bitset/bitvector with size
determined at runtime
to be marke
Your message dated Thu, 11 Jun 2020 15:10:10 +
with message-id
and subject line Bug#962549: fixed in assembly-stats 1.0.1+ds-1
has caused the Debian Bug report #962549,
regarding ITP: assembly-stats -- get assembly statistics from FASTA and FASTQ
files
to be marked as done.
This means that y
Your message dated Thu, 11 Jun 2020 15:19:15 +
with message-id
and subject line Bug#925069: fixed in mpack 1.6-15
has caused the Debian Bug report #925069,
regarding ITA: mpack -- tools for encoding/decoding MIME messages
to be marked as done.
This means that you claim that the problem has be
Your message dated Thu, 11 Jun 2020 15:18:43 +
with message-id
and subject line Bug#812615: fixed in etktab 3.2-11
has caused the Debian Bug report #812615,
regarding ITA: etktab -- ASCII guitar tab editor
to be marked as done.
This means that you claim that the problem has been dealt with.
I
Your message dated Thu, 11 Jun 2020 17:05:37 +
with message-id
and subject line Bug#961348: fixed in sphinx-tabs 1.1.13+ds-1
has caused the Debian Bug report #961348,
regarding ITP: sphinx-tabs -- Tabbed views for Sphinx
to be marked as done.
This means that you claim that the problem has bee
Your message dated Thu, 11 Jun 2020 17:19:12 +
with message-id
and subject line Bug#962082: fixed in escapevelocity-java 0.9.1-1
has caused the Debian Bug report #962082,
regarding ITP: escapevelocity-java -- A subset reimplementation of Apache
Velocity with a much simpler API.
to be marked a
#
# bts-link upstream status pull for source package wnpp
# see http://lists.debian.org/debian-devel-announce/2006/05/msg1.html
# https://bts-link-team.pages.debian.net/bts-link/
#
user debian-bts-l...@lists.debian.org
# remote status report for #721192 (http://bugs.debian.org/721192)
# B
Processing control commands:
> block 962442 by -1
Bug #962442 [wnpp] ITP: mdtraj -- Read, write and analyze MD trajectories in
Python
962442 was not blocked by any bugs.
962442 was not blocking any bugs.
Added blocking bug(s) of 962442: 962683
--
962442: https://bugs.debian.org/cgi-bin/bugrepor
Package: wnpp
Severity: wishlist
Control: block 962442 by -1
* Package name: python3-msmb-theme
Version : 1.2.0
Upstream Author : Dave Snider
* URL : https://github.com/msmbuilder/msmb_theme
* License : MIT
Programming Lang: Python
Description : applies
Processing commands for cont...@bugs.debian.org:
> retitle 831544 ITA: audiolink -- makes managing and searching for music easier
Bug #831544 [wnpp] ITA: maximus -- Automaximizing window management tool
Changed Bug title to 'ITA: audiolink -- makes managing and searching for music
easier' from 'I
Processing commands for cont...@bugs.debian.org:
> block 831544 by 962617
Bug #831544 [wnpp] ITA: audiolink -- makes managing and searching for music
easier
831544 was not blocked by any bugs.
831544 was not blocking any bugs.
Added blocking bug(s) of 831544: 962617
>
End of message, stopping pro
Processing commands for cont...@bugs.debian.org:
> tags 959830 + pending
Bug #959830 [wnpp] 'ITP: google-auth-java -- Open source authentication client
library for Java'
Added tag(s) pending.
> thanks
Stopping processing here.
Please contact me if you need assistance.
--
959830: https://bugs.de
Package: wnpp
Severity: wishlist
* Package name: s2geometry
Version : 0.9.0
Upstream Author : ?
* URL : https://github.com/google/s2geometry
* License : Apache License 2.0
Programming Lang: C++, Python
Description : Computational geometry and spatial ind
Hey Emmanuel.
FYI, I've just filed:
https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=962686
This is the C++ version, which seems however to contain also some
Python SWIG bindings (but I have no idea whether these work or are
complete - OTOH s2phere isn't complete either).
My Python knowledge i
Package: wnpp
Severity: wishlist
Owner: Sean Whitton
* Package name: emacsql
Version : 3.0.0
Upstream Author : Christopher Wellons
* URL : https://github.com/skeeto/emacsql
* License : Unlicense
Programming Lang: Emacs Lisp & C
Description : high level
On 29.05.2020 05:22, Nicholas D Steeves wrote:
Hi Sławomir,
Sławomir Wójcik writes:
On 22.05.2020 05:14, Nicholas D Steeves wrote:
I've merged my changes into new repo initialized by gbp import-dsc from
the old package, it's here:
https://salsa.debian.org/Valdaer/scala-mode-el. Documented al
Your message dated Fri, 12 Jun 2020 03:03:36 +
with message-id
and subject line Bug#772449: fixed in fig2ps 1.5-6
has caused the Debian Bug report #772449,
regarding ITA: fig2ps -- Converts xfig files into ps, eps or pdf files using
LaTeX for processing text
to be marked as done.
This means
Your message dated Fri, 12 Jun 2020 03:19:23 +
with message-id
and subject line Bug#863324: fixed in odt2txt 0.5-6
has caused the Debian Bug report #863324,
regarding ITA: odt2txt -- simple converter from OpenDocument Text
to be marked as done.
This means that you claim that the problem has b
Processing control commands:
> block 962440 by -1
Bug #962440 [wnpp] ITP: mdanalysis -- analyse molecular dynamics files and
trajectories
962440 was not blocked by any bugs.
962440 was not blocking any bugs.
Added blocking bug(s) of 962440: 962690
--
962440: https://bugs.debian.org/cgi-bin/bugr
Package: wnpp
Severity: wishlist
Control: block 962440 by -1
* Package name: python3-mmtf
Version : 1.1.2
Upstream Author : Anthony Bradley
* URL : https://github.com/rcsb/mmtf-python
* License : Apache2
Programming Lang: Python
Description : binary enc
Package: wnpp
Severity: wishlist
Control: block 962440 by -1
* Package name: python3-griddataformats
Version : 0.5.0
Upstream Author : Oliver Beckstein
* URL : https://www.mdanalysis.org/GridDataFormats/
* License : LGPL3+
Programming Lang: Python
Descripti
Processing control commands:
> block 962440 by -1
Bug #962440 [wnpp] ITP: mdanalysis -- analyse molecular dynamics files and
trajectories
962440 was blocked by: 962690
962440 was not blocking any bugs.
Added blocking bug(s) of 962440: 962691
--
962440: https://bugs.debian.org/cgi-bin/bugreport.
Processing control commands:
> tag -1 pending
Bug #961797 [wnpp] ITP: eclipse-remote -- Eclipse Remote Services API
Added tag(s) pending.
--
961797: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=961797
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems
62 matches
Mail list logo