Package: wnpp
Severity: wishlist
X-Debbugs-Cc: debian-pyt...@lists.debian.org, cru...@debian.org
Subject: ITP: sphinxcontrib-sass -- Sphinx extension to compile sass to css in
running sphinx-build
Package: wnpp
Owner: Michael R. Crusoe
Severity: wishlist
* Package name: sphinxcontrib-sass
Package: wnpp
Severity: wishlist
X-Debbugs-Cc: debia...@lists.debian.org, cru...@debian.org
Subject: ITP: r-cran-dharma -- Residual Diagnostics for Hierarchical
(Multi-Level / Mixed)
Package: wnpp
Owner: Michael R. Crusoe
Severity: wishlist
* Package name: r-cran-dharma
Version
Package: wnpp
Severity: wishlist
X-Debbugs-Cc: debia...@lists.debian.org, cru...@debian.org
Subject: ITP: r-cran-gap -- Genetic Analysis Package
Package: wnpp
Owner: Michael R. Crusoe
Severity: wishlist
* Package name: r-cran-gap
Version : 1.6
Upstream Author : Jing Hua Zhao
Package: wnpp
Severity: wishlist
X-Debbugs-Cc: debia...@lists.debian.org, cru...@debian.org
Subject: ITP: r-cran-gap.datasets -- Datasets for 'gap'
Package: wnpp
Owner: Michael R. Crusoe
Severity: wishlist
* Package name: r-cran-gap.datasets
Version : 0.0.6
Upstr
Package: wnpp
Severity: wishlist
X-Debbugs-Cc: debia...@lists.debian.org, cru...@debian.org
Subject: ITP: r-cran-qgam -- Smooth Additive Quantile Regression Models
Package: wnpp
Owner: Michael R. Crusoe
Severity: wishlist
* Package name: r-cran-qgam
Version : 1.3.4
Upstream
Package: wnpp
Severity: wishlist
X-Debbugs-Cc: debia...@lists.debian.org, cru...@debian.org
Subject: ITP: r-cran-cards -- Analysis Results Data
Package: wnpp
Owner: Michael R. Crusoe
Severity: wishlist
* Package name: r-cran-cards
Version : 0.4.0
Upstream Author : Daniel D
Package: wnpp
Severity: wishlist
X-Debbugs-Cc: debia...@lists.debian.org, cru...@debian.org
Subject: ITP: r-cran-s7 -- An Object Oriented System Successor to S3 and S4
Package: wnpp
Owner: Michael R. Crusoe
Severity: wishlist
* Package name: r-cran-s7
Version : 0.2.0
Upstream
Package: wnpp
Severity: wishlist
X-Debbugs-Cc: debian-pyt...@lists.debian.org, cru...@debian.org
Subject: ITP: python-rich-argparse -- Rich help formatters for argparse and
optparse
Package: wnpp
Owner: Michael R. Crusoe
Severity: wishlist
* Package name: python-rich-argparse
Version
Package: wnpp
Severity: wishlist
X-Debbugs-Cc: debia...@lists.debian.org, cru...@debian.org
Subject: ITP: r-bioc-assorthead -- Assorted Header-Only C++ Libraries
Package: wnpp
Owner: Michael R. Crusoe
Severity: wishlist
* Package name: r-bioc-assorthead
Version : 1.0.0+ds
Package: wnpp
Severity: wishlist
X-Debbugs-Cc: cru...@debian.org
Subject: ITP: pyvisa-sim -- Simulated backend for PyVISA implementing TCPIP,
GPIB, RS232, and USB resources
Package: wnpp
Owner: Michael R. Crusoe
Severity: wishlist
* Package name: pyvisa-sim
Version : 0.6.0
Package: wnpp
Severity: wishlist
X-Debbugs-Cc: cru...@debian.org
Subject: ITP: python-html5rdf -- HTML parser based on the WHATWG HTML
specification
Package: wnpp
Owner: Michael R. Crusoe
Severity: wishlist
* Package name: python-html5rdf
Version : 1.2
Upstream Author
On Thu, 28 Jan 2021 21:39:27 +0100 Felix Natter wrote:
hello Jonas,
Jonas Smedegaard writes:
> Quoting Felix Natter (2021-01-24 16:12:39)
>>
>> Control: retitle -1 RFP: twemoji -- Open-sourced Twitter emoji images
>>
>> hello Debian developers,
>>
>> twemoji contains SVGs for twitter emojis as
Package: wnpp
Severity: wishlist
X-Debbugs-Cc: debia...@lists.debian.org, cru...@debian.org
Subject: ITP: r-bioc-golubesets -- exprSets for golub leukemia data
Package: wnpp
Owner: Michael R. Crusoe
Severity: wishlist
* Package name: r-bioc-golubesets
Version : 1.46.0
Upstream
Package: wnpp
Severity: wishlist
X-Debbugs-Cc: debia...@lists.debian.org, cru...@debian.org
Subject: ITP: r-bioc-gsvadata -- Data employed in the vignette of the GSVA
package
Package: wnpp
Owner: Michael R. Crusoe
Severity: wishlist
* Package name : r-bioc-gsvadata
Version : 1.40.0
Upstream
Package: wnpp
Severity: wishlist
X-Debbugs-Cc: debia...@lists.debian.org, cru...@debian.org
Subject: ITP: r-bioc-hgu95a.db -- Affymetrix Affymetrix HG_U95A Array
annotation data (chip
Package: wnpp
Owner: Michael R. Crusoe
Severity: wishlist
* Package name : r-bioc-hgu95a.db
Version : 3.13.0
Package: wnpp
Severity: wishlist
X-Debbugs-Cc: debia...@lists.debian.org, cru...@debian.org
Subject: ITP: r-cran-rmariadb -- Database Interface and 'MariaDB' Driver
Package: wnpp
Owner: Michael R. Crusoe
Severity: wishlist
* Package name : r-cran-rmariadb
Version : 1.3.2+ds
Upstr
Package: wnpp
Severity: wishlist
X-Debbugs-Cc: debia...@lists.debian.org, cru...@debian.org
Subject: ITP: r-bioc-spatialexperiment -- S4 Class for Spatially Resolved
-omics Data
Package: wnpp
Owner: Michael R. Crusoe
Severity: wishlist
* Package name : r-bioc-spatialexperiment
Version
Package: wnpp
Severity: wishlist
X-Debbugs-Cc: debia...@lists.debian.org, cru...@debian.org
Subject: ITP: r-bioc-alabaster.ranges -- Load and Save Ranges-related Artifacts
from File
Package: wnpp
Owner: Michael R. Crusoe
Severity: wishlist
* Package name : r-bioc-alabaster.ranges
Version
Package: wnpp
Severity: wishlist
X-Debbugs-Cc: debia...@lists.debian.org, cru...@debian.org
Subject: ITP: r-bioc-alabaster.matrix -- Load and Save Artifacts from File
Package: wnpp
Owner: Michael R. Crusoe
Severity: wishlist
* Package name : r-bioc-alabaster.matrix
Version : 1.4.2+ds
Upstream
Package: wnpp
Severity: wishlist
X-Debbugs-Cc: debia...@lists.debian.org, cru...@debian.org
Subject: ITP: r-bioc-alabaster.se -- Load and Save SummarizedExperiments from
File
Package: wnpp
Owner: Michael R. Crusoe
Severity: wishlist
* Package name : r-bioc-alabaster.se
Version : 1.4.1+ds
Package: wnpp
Severity: wishlist
X-Debbugs-Cc: debia...@lists.debian.org, cru...@debian.org
Subject: ITP: r-bioc-alabaster.sce -- Load and Save SingleCellExperiment from
File
Package: wnpp
Owner: Michael R. Crusoe
Severity: wishlist
* Package name : r-bioc-alabaster.sce
Version : 1.4.0+ds
Package: wnpp
Severity: wishlist
X-Debbugs-Cc: debia...@lists.debian.org, cru...@debian.org
Subject: ITP: r-bioc-txdbmaker -- Tools for making TxDb objects from genomic
annotations
Package: wnpp
Owner: Michael R. Crusoe
Severity: wishlist
* Package name : r-bioc-txdbmaker
Version : 1.0.1+ds
Package: wnpp
Severity: wishlist
X-Debbugs-Cc: debia...@lists.debian.org, cru...@debian.org
Subject: ITP: r-cran-httptest2 -- Test Helpers for 'httr2'
Package: wnpp
Owner: Michael R. Crusoe
Severity: wishlist
* Package name : r-cran-httptest2
Version : 1.1.0+ds
Upstream Aut
Package: wnpp
Severity: wishlist
X-Debbugs-Cc: debia...@lists.debian.org, cru...@debian.org
Subject: ITP: r-bioc-pwalign -- Perform pairwise sequence alignments
Package: wnpp
Owner: Michael R. Crusoe
Severity: wishlist
* Package name : r-bioc-pwalign
Version : 1.0.0
Upstream Author : Patrick
Package: wnpp
Severity: wishlist
X-Debbugs-Cc: debia...@lists.debian.org, cru...@debian.org
Subject: ITP: r-bioc-gypsum -- Interface to the gypsum REST API
Package: wnpp
Owner: Michael R. Crusoe
Severity: wishlist
* Package name : r-bioc-gypsum
Version : 1.0.1+ds
Upstream Author : Aaron Lun
Package: wnpp
Severity: wishlist
X-Debbugs-Cc: debia...@lists.debian.org, cru...@debian.org
Subject: ITP: r-bioc-ucsc.utils -- Low-level utilities to retrieve data from
the UCSC Genome
Package: wnpp
Owner: Michael R. Crusoe
Severity: wishlist
* Package name : r-bioc-ucsc.utils
Version : 1.0.0
Package: wnpp
Severity: wishlist
X-Debbugs-Cc: debia...@lists.debian.org, cru...@debian.org
Subject: ITP: r-bioc-alabaster.base -- Save Bioconductor Objects To File
Package: wnpp
Owner: Michael R. Crusoe
Severity: wishlist
* Package name : r-bioc-alabaster.base
Version : 1.4.2
Upstream Author
Package: wnpp
Severity: wishlist
X-Debbugs-Cc: debia...@lists.debian.org, cru...@debian.org
Subject: ITP: r-bioc-alabaster.schemas -- Schemas for the Alabaster Framework
Package: wnpp
Owner: Michael R. Crusoe
Severity: wishlist
* Package name : r-bioc-alabaster.schemas
Version : 1.4.0+ds
Package: wnpp
Owner: Michael R. Crusoe
Severity: wishlist
* Package name : python-hatch-mypyc
Version : 0.16.0
Upstream Author : Ofek Lev
* URL : https://github.com/ofek/hatch-mypyc
* License : Expat
Programming Lang: Python
Description : Hatch build hook plugin for Mypyc
Provides a build hook
Package: wnpp
Severity: wishlist
X-Debbugs-Cc: cru...@debian.org
Subject: ITP: python-sphinx-codeautolink -- Automatic links from code examples
to reference documentation
Package: wnpp
Owner: Michael R. Crusoe
Severity: wishlist
* Package name : python-sphinx-codeautolink
Version : 0.15.0
Package: wnpp
Severity: wishlist
X-Debbugs-Cc: cru...@debian.org
Subject: ITP: python-pytest-retry -- Adds the ability to retry flaky
tests in pytest
Package: wnpp
Owner: Michael R. Crusoe
Severity: wishlist
* Package name : python-pytest-retry
Version : 1.6.2
Upstream Author : Copyright: (c
Package: wnpp
Severity: wishlist
X-Debbugs-Cc: cru...@debian.org
Subject: ITP: python-spython -- Command line python tool for working
with Singularity
Package: wnpp
Owner: Michael R. Crusoe
Severity: wishlist
* Package name : python-spython
Version : 0.3.13
Upstream Author : , Vanessa Sochat
Package: wnpp
Severity: wishlist
X-Debbugs-Cc: cru...@debian.org
Subject: ITP: python-pcre2 -- Python bindings for the PCRE2 regular
expression library
Package: wnpp
Owner: Michael R. Crusoe
Severity: wishlist
* Package name : python-pcre2
Version : 0.2.0+ds
Upstream Author : grtetrault
Package: wnpp
Severity: wishlist
X-Debbugs-Cc: cru...@debian.org
Subject: ITP: subarch-select -- Select among binaries based upon x86
microarchitecture support
Package: wnpp
Owner: Michael R. Crusoe
Severity: wishlist
* Package name: subarch-select
Version : 0.1
Upstream Author
Package: wnpp
Severity: wishlist
X-Debbugs-Cc: cru...@debian.org
Subject: ITP: cwltest -- Common Workflow Language testing framework
Package: wnpp
Owner: Michael R. Crusoe
Severity: wishlist
* Package name: cwltest
Version : 2.3.20230607140609
Upstream Author : CWL, a project of
Package: wnpp
Severity: wishlist
X-Debbugs-Cc: cru...@debian.org
Subject: ITP: seqan-needle -- pre-filter for the counting of very large
collections of nucleotide sequences
Package: wnpp
Owner: Michael R. Crusoe
Severity: wishlist
* Package name: seqan-needle
Version : 1.0.1.0.0
Package: wnpp
Severity: wishlist
X-Debbugs-Cc: cru...@debian.org
Subject: ITP: seqan-raptor -- pre-filter for querying very large collections of
nucleotide sequences
Package: wnpp
Owner: Michael R. Crusoe
Severity: wishlist
* Package name: seqan-raptor
Version : 2.0.0.0
Package: wnpp
Severity: wishlist
X-Debbugs-Cc: cru...@debian.org
Subject: ITP: pytest-httpserver -- HTTP server for pytest to test HTTP clients
Package: wnpp
Owner: Michael R. Crusoe
Severity: wishlist
* Package name: pytest-httpserver
Version : 1.0.6
Upstream Author : Zsolt
Package: wnpp
Severity: wishlist
X-Debbugs-Cc: cru...@debian.org
Subject: ITP: cwl-utils -- Python Utilities and Autogenerated Classes for CWL
v1.0 - v1.2
Package: wnpp
Owner: Michael R. Crusoe
Severity: wishlist
* Package name: cwl-utils
Version : 0.16
Upstream Author
is package will be maintained in the collaborative Debian section of
Salsa.
Dear Jonas,
Thank you for your ITP! I'm the upstream maintainer; also of cwltool,
toil, python-schema-salad. Feel free to add me as a co-maintainer.
If you are open to team maintenance, may I suggest Debian Sc
Package: wnpp
Severity: wishlist
X-Debbugs-Cc: cru...@debian.org
Subject: ITP: python-types-dataclasses -- Typing stubs for dataclasses
Package: wnpp
Owner: Michael R. Crusoe
Severity: wishlist
* Package name: python-types-dataclasses
Version : 0.1.7
Upstream Author : Gary van
Package: wnpp
Severity: wishlist
X-Debbugs-Cc: cru...@debian.org
Subject: ITP: python-tomli -- lil' TOML parser for Python
Package: wnpp
Owner: Michael R. Crusoe
Severity: wishlist
* Package name: python-tomli
Version : 1.2.1
Upstream Author : Taneli Hukkinen
Package: wnpp
Severity: wishlist
X-Debbugs-Cc: cru...@debian.org
Subject: ITP: python-types-typed-ast -- Typing stubs for typed-ast
Package: wnpp
Owner: Michael R. Crusoe
Severity: wishlist
* Package name: python-types-typed-ast
Version : 1.4.4
Upstream Author :
* URL
Package: wnpp
Severity: wishlist
X-Debbugs-Cc: cru...@debian.org
Subject: ITP: python-types-toml -- Typing stubs for toml
Package: wnpp
Owner: Michael R. Crusoe
Severity: wishlist
* Package name: python-types-toml
Version : 0.1.5
Upstream Author :
* URL : https
Package: wnpp
Severity: wishlist
X-Debbugs-Cc: cru...@debian.org
Subject: ITP: r-bioc-rcwl -- An R interface to the Common Workflow Language
Package: wnpp
Owner: Michael R. Crusoe
Severity: wishlist
* Package name: r-bioc-rcwl
Version : 1.6.0+ds
Upstream Author : Qiang Hu,
* URL
Package: wnpp
Severity: wishlist
X-Debbugs-Cc: cru...@debian.org
Subject: ITP: r-cran-diagrammer -- Graph/Network Visualization
Package: wnpp
Owner: Michael R. Crusoe
Severity: wishlist
* Package name: r-cran-diagrammer
Version : 1.0.6.1+ds
Upstream Author : Richard Iannone
Package: wnpp
Severity: wishlist
X-Debbugs-Cc: cru...@debian.org
Subject: ITP: r-cran-influencer -- Software Tools to Quantify Structural
Importance of Nodes in a
Package: wnpp
Owner: Michael R. Crusoe
Severity: wishlist
* Package name: r-cran-influencer
Version : 0.1.0
Package: wnpp
Severity: wishlist
X-Debbugs-Cc: cru...@debian.org
Subject: ITP: r-cran-visnetwork -- Network Visualization using 'vis.js' Library
Package: wnpp
Owner: Michael R. Crusoe
Severity: wishlist
* Package name: r-cran-visnetwork
Version : 2.0.9+ds
Upstr
Package: wnpp
Severity: wishlist
X-Debbugs-Cc: cru...@debian.org
Subject: ITP: libbiosoup-dev -- C++ header-only support library for
bioinformatics tools
Package: wnpp
Owner: Michael R. Crusoe
Severity: wishlist
* Package name: libbiosoup-dev
Version : 0.10.0
Upstream Author
omatically run autodep8 which
> fails because the import name is community and not louvain.
>
In the short term I recommend fixing this by adding a file to the Debian
python-louvain package named "debian/tests/autopkgtest-pkg-python.conf"
with the contents "import_name = community"
--
Michael R. Crusoe
Package: wnpp
Severity: wishlist
X-Debbugs-Cc: cru...@debian.org
Subject: ITP: uncalled -- Utility for Nanopore Current Alignment to Large
Expanses of DNA
Package: wnpp
Owner: Michael R. Crusoe
Severity: wishlist
* Package name: uncalled
Version : 2.2+ds
Upstream Author : , Sam
Package: wnpp
Severity: wishlist
X-Debbugs-Cc: cru...@debian.org
Subject: ITP: r-bioc-scrnaseq -- Collection of Public Single-Cell RNA-Seq
Datasets
Package: wnpp
Owner: Michael R. Crusoe
Severity: wishlist
* Package name: r-bioc-scrnaseq
Version : 2.4.0+ds
Upstream Author
Package: wnpp
Severity: wishlist
X-Debbugs-Cc: cru...@debian.org
Subject: ITP: python-stubserver -- mock tester of external web dependencies for
Python
Package: wnpp
Owner: Michael R. Crusoe
Severity: wishlist
* Package name: python-stubserver
Version : 1.1
Upstream Author
Package: wnpp
Severity: wishlist
X-Debbugs-Cc: cru...@debian.org
Subject: ITP: python-wdlparse -- Workflow Description Language (WDL) parser for
Python
Package: wnpp
Owner: Michael R. Crusoe
Severity: wishlist
* Package name: python-wdlparse
Version : 0.1.0
Upstream Author
Package: wnpp
Severity: wishlist
-BEGIN PGP SIGNED MESSAGE-
Hash: SHA512
Subject: ITP: r-cran-bench -- High Precision Timing of R Expressions
Package: wnpp
Owner: Michael R. Crusoe
Severity: wishlist
* Package name: r-cran-bench
Version : 1.1.1
Upstream Author : Jim
Package: wnpp
Severity: wishlist
-BEGIN PGP SIGNED MESSAGE-
Hash: SHA512
Subject: ITP: r-cran-profmem -- Simple Memory Profiling for R
Package: wnpp
Owner: Michael R. Crusoe
Severity: wishlist
* Package name: r-cran-profmem
Version : 0.5.0
Upstream Author : Henrik
Package: wnpp
Severity: wishlist
-BEGIN PGP SIGNED MESSAGE-
Hash: SHA512
Subject: ITP: r-bioc-bluster -- Clustering Algorithms for Bioconductor
Package: wnpp
Owner: Michael R. Crusoe
Severity: wishlist
* Package name: r-bioc-bluster
Version : 1.0.0
Upstream Author
Package: wnpp
Severity: wishlist
-BEGIN PGP SIGNED MESSAGE-
Hash: SHA512
Subject: ITP: r-bioc-glmgampoi -- GNU R fit a Gamma-Poisson generalized linear
model
Package: wnpp
Owner: Michael R. Crusoe
Severity: wishlist
* Package name: r-bioc-glmgampoi
Version : 1.2.0
On Sun, Jun 7, 2020 at 10:35 AM Drew Parsons wrote:
> On 2020-06-07 15:59, Michael R. Crusoe wrote:
> > My initial package is at
> > https://salsa.debian.org/crusoe/ruamel.yaml.clib
> >
> > Drew, if you would like to take over then I am happy to give it to
> >
My initial package is at https://salsa.debian.org/crusoe/ruamel.yaml.clib
Drew, if you would like to take over then I am happy to give it to you.
Thank you for also caring about ruamel.yaml!
--
Michael R. Crusoe
Package: wnpp
Severity: wishlist
Subject: ITP: rust-elfx86exts -- Print instruction sets used by x86 binaries
(ELF or MachO)
Package: wnpp
Owner: Michael R. Crusoe
Severity: wishlist
* Package name: rust-elfx86exts
Version : 0.3.0
Upstream Author : Peter Williams
* URL
Package: wnpp
Severity: wishlist
Subject: ITP: odgi -- optimized dynamic genome/graph implementation
Package: wnpp
Owner: Michael R. Crusoe
Severity: wishlist
* Package name: odgi
Version : 0.4.1
Upstream Author : , Erik Garrison
* URL : https://github.com/vgteam
Package: wnpp
Severity: wishlist
Subject: ITP: r-bioc-dexseq -- Inference of differential exon usage in RNA-Seq
Package: wnpp
Owner: Michael R. Crusoe
Severity: wishlist
* Package name: r-bioc-dexseq
Version : 1.32.0
Upstream Author : Simon Anders and Alejandro Reyes
* URL
Package: wnpp
Severity: wishlist
Subject: ITP: r-cran-goplot -- Visualization of Functional Analysis Data
Package: wnpp
Owner: Michael R. Crusoe
Severity: wishlist
* Package name: r-cran-goplot
Version : 1.0.2
Upstream Author : Wencke Walter,
* URL : https://cran.r
Package: wnpp
Severity: wishlist
Subject: ITP: r-cran-findpython -- Functions to Find an Acceptable Python Binary
Package: wnpp
Owner: Michael R. Crusoe
Severity: wishlist
* Package name: r-cran-findpython
Version : 1.0.5
Upstream Author : Trevor L Davis,
* URL
Package: wnpp
Severity: wishlist
Subject: ITP: r-cran-argparse -- Command Line Optional and Positional Argument
Parser
Package: wnpp
Owner: Michael R. Crusoe
Severity: wishlist
* Package name: r-cran-argparse
Version : 2.0.1
Upstream Author : Trevor L Davis
* URL
Package: wnpp
Severity: wishlist
Subject: ITP: libbio-tradis-perl -- set of tools to analyse the output from
TraDIS analyses.
Package: wnpp
Owner: Michael R. Crusoe
Severity: wishlist
* Package name: libbio-tradis-perl
Version : 1.4.5
Upstream Author : , Carla Cummins
* URL
Package: wnpp
Severity: wishlist
Subject: ITP: ruamel.yaml.clib -- C version of reader, parser and emitter for
ruamel.yaml
Package: wnpp
Owner: Michael R. Crusoe
Severity: wishlist
* Package name: ruamel.yaml.clib
Version : 0.2.0
Upstream Author : , Anthon van der Neut, Ruamel
Package: wnpp
Severity: wishlist
Subject: ITP: r-cran-sna -- Tools for Social Network Analysis
Package: wnpp
Owner: Michael R. Crusoe
Severity: wishlist
* Package name: r-cran-sna
Version : 2.5
Upstream Author : Carter T. Butts
* URL : https://cran.r-project.org
Package: wnpp
Severity: wishlist
Subject: ITP: r-cran-statnet.common -- Common R Scripts and Utilities Used by
the Statnet Project
Package: wnpp
Owner: Michael R. Crusoe
Severity: wishlist
* Package name: r-cran-statnet.common
Version : 4.3.0
Upstream Author : Pavel N
Package: wnpp
Severity: wishlist
Subject: ITP: r-cran-network -- Classes for Relational Data
Package: wnpp
Owner: Michael R. Crusoe
Severity: wishlist
* Package name: r-cran-network
Version : 1.16.0
Upstream Author : Carter T. Butts,
* URL : https://cran.r
Package: wnpp
Severity: wishlist
Subject: ITP: ataqv -- ATAC-seq QC and visualization
Package: wnpp
Owner: Michael R. Crusoe
Severity: wishlist
* Package name: ataqv
Version : 1.1.1+ds
Upstream Author : Stephen Parker
* URL : https://github.com/ParkerLab/ataqv
Package: wnpp
Severity: wishlist
Subject: ITP: gerp++ -- identifies constrained elements in multiple alignments
Package: wnpp
Owner: Michael R. Crusoe
Severity: wishlist
* Package name: gerp++
Version : 2.1
Upstream Author : , George Asimenos
* URL : http
Package: wnpp
Severity: wishlist
Subject: ITP: libfile-sort-perl -- module to sort a file or merge sort multiple
files
Package: wnpp
Owner: Michael R. Crusoe
Severity: wishlist
* Package name: libfile-sort-perl
Version : 1.01
Upstream Author : , Chris Nandor , http://pudge.net
Package: wnpp
Severity: wishlist
Subject: ITP: htscodecs -- Custom compression for CRAM and others
Package: wnpp
Owner: Michael R. Crusoe
Severity: wishlist
* Package name: htscodecs
Version : 0.5
Upstream Author : , Genome Research Ltd.
* URL : https://github.com
Package: wnpp
Severity: wishlist
Subject: ITP: routine-update -- routine updater for a Debian source package
Package: wnpp
Owner: Michael R. Crusoe
Severity: wishlist
* Package name: routine-update
Version : 0.0.1
Upstream Author : Andreas Tille
* URL : https
Package: wnpp
Severity: wishlist
Subject: ITP: bwa-mem2 -- the next version of the bwa-mem algorithm in bwa
Package: wnpp
Owner: Michael R. Crusoe
Severity: wishlist
* Package name: bwa-mem2
Version : 2.0~pre2
Upstream Author : , Vasimuddin Md, Sanchit Misra, Intel Corporation
Package: wnpp
Severity: wishlist
Subject: ITP: libsys-info-perl -- Fetch information from the host system
Package: wnpp
Owner: Michael R. Crusoe
Severity: wishlist
* Package name: libsys-info-perl
Version : 0.7811
Upstream Author : , Burak Gursoy
* URL : https
Package: wnpp
Severity: wishlist
Subject: ITP: libsys-info-driver-linux-perl -- Linux driver for Sys::Info
Package: wnpp
Owner: Michael R. Crusoe
Severity: wishlist
* Package name: libsys-info-driver-linux-perl
Version : 0.7905
Upstream Author : , Burak Gursoy
* URL
Package: wnpp
Severity: wishlist
Subject: ITP: libbio-featureio-perl -- Modules for reading, writing, and
manipulating sequence features
Package: wnpp
Owner: Michael R. Crusoe
Severity: wishlist
* Package name: libbio-featureio-perl
Version : 1.6.905
Upstream Author : BioPerl
Package: wnpp
Severity: wishlist
Subject: ITP: hopscotch-map -- C++ fast hash map and hash set using hopscotch
hashing
Package: wnpp
Owner: Michael R. Crusoe
Severity: wishlist
* Package name: hopscotch-map
Version : 2.2.1
Upstream Author : Tessil
* URL : https
Package: wnpp
Severity: wishlist
Package: wnpp
Severity: wishlist
Owner: Michael R. Crusoe
* Package name: golang-github-abeconnelly-autoio
Version : 0.0~git20150803.989b7b0-1
Upstream Author : Abram Connelly
* URL : https://github.com/abeconnelly/autoio
* License
Package: wnpp
Severity: wishlist
Subject: ITP: libbio-variation-perl -- BioPerl variation-related functionality
Package: wnpp
Owner: Michael R. Crusoe
Severity: wishlist
* Package name: libbio-variation-perl
Version : 1.7.4
Upstream Author : Copyright: Allen Day , Heikki
Package: wnpp
Severity: wishlist
Subject: ITP: simde -- Implementations of SIMD instructions for all systems
Package: wnpp
Owner: Michael R. Crusoe
Severity: wishlist
* Package name: simde
Version : 0.0.0.git.20191205.c2e740c
Upstream Author : , Evan Nemerson
* URL
Package: wnpp
Severity: wishlist
Subject: ITP: libbio-procedural-perl -- Simple low-dependency procedural
interfaces to BioPerl
Package: wnpp
Owner: Michael R. Crusoe
Severity: wishlist
* Package name: libbio-procedural-perl
Version : 1.7.4
Upstream Author : Copyright: Ewan
Package: wnpp
Severity: wishlist
Subject: ITP: libbio-db-refseq-perl -- Database object interface for RefSeq
retrieval
Package: wnpp
Owner: Michael R. Crusoe
Severity: wishlist
* Package name: libbio-db-refseq-perl
Version : 1.7.3
Upstream Author : Copyright: Heikki Lehvaslaiho
Package: wnpp
Severity: wishlist
Subject: ITP: libbio-db-swissprot-perl -- Database object interface to
SwissProt retrieval
Package: wnpp
Owner: Michael R. Crusoe
Severity: wishlist
* Package name: libbio-db-swissprot-perl
Version : 1.7.3
Upstream Author : Copyright: Jason
Package: wnpp
Severity: wishlist
Subject: ITP: pufferfish -- An efficient index for the colored, compacted, de
Bruijn graph
Package: wnpp
Owner: Michael R. Crusoe
Severity: wishlist
* Package name: pufferfish
Version : 1.0.0
Upstream Author : , 2016 Rob Patro, Avi Srivastava
Package: wnpp
Severity: wishlist
Subject: ITP: libbio-db-ncbihelper-perl -- collection of routines useful for
queries to NCBI databases.
Package: wnpp
Owner: Michael R. Crusoe
Severity: wishlist
* Package name: libbio-db-ncbihelper-perl
Version : 1.7.4
Upstream Author
Package: wnpp
Severity: wishlist
Subject: ITP: libbio-tools-run-remoteblast-perl -- Object for remote execution
of the NCBI Blast via HTTP
Package: wnpp
Owner: Michael R. Crusoe
Severity: wishlist
* Package name: libbio-tools-run-remoteblast-perl
Version : 1.7.3
Upstream Author
Package: wnpp
Severity: wishlist
Subject: ITP: libbio-cluster-perl -- BioPerl cluster modules
Package: wnpp
Owner: Michael R. Crusoe
Severity: wishlist
* Package name: libbio-cluster-perl
Version : 1.7.3
Upstream Author : Copyright: Allen Day , Andrew Macgregor
, David Green
Package: wnpp
Severity: wishlist
Subject: ITP: libbio-db-seqfeature-perl -- Normalized feature for use with
Bio::DB::SeqFeature::Store
Package: wnpp
Owner: Michael R. Crusoe
Severity: wishlist
* Package name: libbio-db-seqfeature-perl
Version : 1.7.3
Upstream Author : Copyright
Package: wnpp
Severity: wishlist
Subject: ITP: libbio-db-embl-perl -- Database object interface for EMBL entry
retrieval
Package: wnpp
Owner: Michael R. Crusoe
Severity: wishlist
* Package name: libbio-db-embl-perl
Version : 1.7.4
Upstream Author : Copyright: Heikki Lehvaslaiho
Package: wnpp
Severity: wishlist
Subject: ITP: libbio-db-ace-perl -- Database object interface to ACeDB servers
Package: wnpp
Owner: Michael R. Crusoe
Severity: wishlist
* Package name: libbio-db-ace-perl
Version : 1.7.3
Upstream Author : Copyright: Ewan Birney , Lincoln Stein
Package: wnpp
Severity: wishlist
Subject: ITP: libbio-db-gff-perl -- Storage and retrieval of sequence
annotation data
Package: wnpp
Owner: Michael R. Crusoe
Severity: wishlist
* Package name: libbio-db-gff-perl
Version : 1.7.3
Upstream Author : Copyright: (c) 2001-2003, 2005
Package: wnpp
Severity: wishlist
Subject: ITP: libbio-db-biofetch-perl -- Database object interface to BioFetch
retrieval
Package: wnpp
Owner: Michael R. Crusoe
Severity: wishlist
* Package name: libbio-db-biofetch-perl
Version : 1.7.3
Upstream Author : Copyright: Lincoln Stein
Package: wnpp
Severity: wishlist
Subject: ITP: libbio-alignio-stockholm-perl -- stockholm sequence input/output
stream
Package: wnpp
Owner: Michael R. Crusoe
Severity: wishlist
* Package name: libbio-alignio-stockholm-perl
Version : 1.7.3
Upstream Author : Copyright: Peter
Package: wnpp
Severity: wishlist
Subject: ITP: libbio-searchio-hmmer-perl -- perl parser for HMMER2 and HMMER3
output (hmmscan, hmmsearch, hmmpfam)
Package: wnpp
Owner: Michael R. Crusoe
Severity: wishlist
* Package name: libbio-searchio-hmmer-perl
Version : 1.7.3
Upstream
Package: wnpp
Severity: wishlist
Subject: ITP: megadock -- ultra-high-performance protein-protein docking for
heterogeneous supercomputers
Package: wnpp
Owner: Michael R. Crusoe
Severity: wishlist
* Package name: megadock
Version : 4.1.1
Upstream Author : Copyright: © 2014-2018
Package: wnpp
Severity: wishlist
Subject: ITP: vg -- tools for working with genome variation graphs
Package: wnpp
Owner: Michael R. Crusoe
Severity: wishlist
* Package name: vg
Version : 1.18.0+ds
Upstream Author : Copyright: © 2014 Erik Garrison
* URL : https
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