Am Sun, May 22, 2022 at 07:43:35PM +0530 schrieb Nilesh Patra:
> >I've just commited a patch thet ignores the not yet packaged test
> >dependency which causes the test failure. In any case r-bioc-scater
>
> Then please make an upload.
https://salsa.debian.org/r-pkg-team/r-bioc-scater/-/jobs/2796
On 22 May 2022 7:05:18 pm IST, Andreas Tille wrote:
>Hi Graham,
>
>Am Sun, May 22, 2022 at 09:09:01AM +0200 schrieb Graham Inggs:
>> It looks like the only blocker now is waiting for r-bioc-scater [1] to age:
>>
>> Too young, only 2 of 5 days old
>>
>> It doesn't get 2-day migration because i
Hi Graham,
Am Sun, May 22, 2022 at 09:09:01AM +0200 schrieb Graham Inggs:
> It looks like the only blocker now is waiting for r-bioc-scater [1] to age:
>
> Too young, only 2 of 5 days old
>
> It doesn't get 2-day migration because its autopkgtest regressed in
> testing, sometime around 2021-09-2
Hi Nilesh
It looks like the only blocker now is waiting for r-bioc-scater [1] to age:
Too young, only 2 of 5 days old
It doesn't get 2-day migration because its autopkgtest regressed in
testing, sometime around 2021-09-23 [2].
I'll file a separate bug for that.
Regards
Graham
[1] https://tra
Hi Nilesh
On Sat, 21 May 2022 at 07:03, Nilesh Patra wrote:
It looks like britney has already figured these out:
> r-bioc-annotationdbiset ignore for r-bioc-annotationhub (version in
> unstable passes)
> r-bioc-scran/beachmat Please run tests with new version of biocparallel
I'l
Hi Graham,
I did some work to cleanup the rest stuff meanwhile, and need
your help to ignore some of the CI temporarily to complete the migration; and
also because unstable counterparts pass.
I have pasted a list at the end of this email, please see to it.
--
Best,
Nilesh
Package
Hi Paul,
Am Thu, May 19, 2022 at 01:07:59PM +0200 schrieb Paul Gevers:
> @tille, removals are work for *us*, they are not free lunch. Please fix the
> package that prevent migration.
There is no clean fix. The packages featuring r-bioc-api-3.15 just need
some new predependencies. These are hang
On 19 May 2022 2:25:23 pm IST, Andreas Tille wrote:
>Am Thu, May 19, 2022 at 01:41:12PM +0530 schrieb Nilesh Patra:
>>
>> I think we can workaround these anyway by editing the DESCRIPTION file --
>> maybe I'll do so and upload either late in the night today or early morning
>> Tom.
>
>I do n
Hi,
On 19-05-2022 10:55, Andreas Tille wrote:
Am Thu, May 19, 2022 at 01:41:12PM +0530 schrieb Nilesh Patra:
I think we can workaround these anyway by editing the DESCRIPTION file -- maybe
I'll do so and upload either late in the night today or early morning Tom.
I do not think that editing
Hi Nilesh,
Am Thu, May 19, 2022 at 01:41:12PM +0530 schrieb Nilesh Patra:
>
> I think we can workaround these anyway by editing the DESCRIPTION file --
> maybe I'll do so and upload either late in the night today or early morning
> Tom.
I do not think that editing DESCRIPTION is the prefered w
Am Thu, May 19, 2022 at 09:40:23AM +0200 schrieb Paul Gevers:
> Package: release.debian.org
> User: release.debian@packages.debian.org
> Usertag: britney
>
> Hi,
>
> On 11-05-2022 12:34, Graham Inggs wrote:
> > Yes, please go ahead.
> >
> > Tracker is at:
> > https://release.debian.org/trans
Hi,
On 19 May 2022 1:10:23 pm IST, Paul Gevers wrote:
>Package: release.debian.org
>User: release.debian@packages.debian.org
>Usertag: britney
>
>Hi,
>
>On 11-05-2022 12:34, Graham Inggs wrote:
>> Yes, please go ahead.
>>
>> Tracker is at:
>> https://release.debian.org/transitions/html/r-
Hi
On Thu, 19 May 2022 at 09:45, Paul Gevers wrote:
> There's three package still waiting for an upload, r-bioc-progeny,
> r-bioc-monocle and r-bioc-scater. When is the ETA for those?
In addition, there is r-bioc-grohmm which I happened to notice dropped
off the tracker during the transition.
i.
Package: release.debian.org
User: release.debian@packages.debian.org
Usertag: britney
Hi,
On 11-05-2022 12:34, Graham Inggs wrote:
Yes, please go ahead.
Tracker is at:
https://release.debian.org/transitions/html/r-api-bioc-3.15.html
There's three package still waiting for an upload, r-bi
Processing control commands:
> tags -1 = confirmed
Bug #1010422 [release.debian.org] transition: r-api-bioc-3.15
Added tag(s) confirmed.
--
1010422: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=1010422
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems
Control: tags -1 = confirmed
Hi Nilesh, Dylan
On Wed, 11 May 2022 at 11:33, Nilesh Patra wrote:
>
>
>
> On 11 May 2022 2:06:08 pm IST, "Dylan Aïssi" wrote:
> >Hi all,
> >
> >> Am Fri, May 06, 2022 at 06:10:52PM +0530 schrieb Nilesh Patra:
> >> >
> >> > I have done so, I think we can start the t
On 11 May 2022 2:06:08 pm IST, "Dylan Aïssi" wrote:
>Hi all,
>
>> Am Fri, May 06, 2022 at 06:10:52PM +0530 schrieb Nilesh Patra:
>> >
>> > I have done so, I think we can start the transition. Please consider
>> > pushing
>> > the buttons to get the tracker up :)
>>
>
>To be sure, have we the g
Hi all,
> Am Fri, May 06, 2022 at 06:10:52PM +0530 schrieb Nilesh Patra:
> >
> > I have done so, I think we can start the transition. Please consider pushing
> > the buttons to get the tracker up :)
>
To be sure, have we the green light from the release team to start
this transition?
Best,
Dylan
Hi Nilesh,
Am Fri, May 06, 2022 at 06:10:52PM +0530 schrieb Nilesh Patra:
>
> I think I did the changes as I wanted to, all graphics packages and all the
> important cran packages for that matter (including rmatrix) have now migrated.
Thanks a lot.
> > Please remove the moreinfo tag once you
Control: tags -1 - moreinfo
Hi Graham/Andreas,
On Tue, May 03, 2022 at 04:04:22PM +0200, Graham Inggs wrote:
> On Tue, 3 May 2022 at 15:51, Nilesh Patra wrote:
> > I am now trying to get ggplot2 and friends in testing. Please give
> > it time until this weekend to migrate after which I will remo
On Tue, May 03, 2022 at 04:04:22PM +0200, Graham Inggs wrote:
> Control: tags -1 + moreinfo
> > I am now trying to get ggplot2 and friends in testing. Please give
> > it time until this weekend to migrate after which I will remove
> > my hacks and re-upload.
>
> Please also look at rmatrix, it is
Control: tags -1 + moreinfo
Hi Nilesh
On Tue, 3 May 2022 at 15:51, Nilesh Patra wrote:
>
> Andreas Tille wrote:
> >> >I guess your recent upload of 0.1.2.1-3 is supposed to fix this and
> >> >is intended to enable the migration, right?
> >> >
> >>
> >> Yes, let's wait until r-base migrates, I gu
On 2 May 2022 11:54:34 am IST, Andreas Tille wrote:
>Am Mon, May 02, 2022 at 09:39:25AM +0530 schrieb Nilesh Patra:
>> On Sun, 1 May 2022 11:42:07 +0200 =?UTF-8?B?RHlsYW4gQcOvc3Np?=
>> wrote:
>> > Hi,
>> > Bioconductor 3.15 has been released [1].
>>
>> Please hold this off until r-base migra
Am Mon, May 02, 2022 at 09:39:25AM +0530 schrieb Nilesh Patra:
> On Sun, 1 May 2022 11:42:07 +0200 =?UTF-8?B?RHlsYW4gQcOvc3Np?=
> wrote:
> > Hi,
> > Bioconductor 3.15 has been released [1].
>
> Please hold this off until r-base migrates (which should be soon)
As far as I can see the testing mig
On Sun, 1 May 2022 11:42:07 +0200 =?UTF-8?B?RHlsYW4gQcOvc3Np?=
wrote:
> Hi,
> Bioconductor 3.15 has been released [1].
Please hold this off until r-base migrates (which should be soon)
--
Best,
Nilesh
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Hi,
Bioconductor 3.15 has been released [1].
[1] https://bioconductor.org/news/bioc_3_15_release/
Like for previous r-api-bioc transitions, all
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