Hi Piotr
On Tue, Nov 25, 2014 at 4:00 PM, Piotr Ożarowski wrote:
> [Jorge Sebastião Soares, 2014-11-25]
> > Hi all,
> >
> > I am thinking to go about this in one of two ways:
> >
> > 1 - State python3-pip as a dependency and use pip3 to install pysam the
> > python3 lib folder;
> >
> > 2 - Packa
[Jorge Sebastião Soares, 2014-11-25]
> Hi all,
>
> I am thinking to go about this in one of two ways:
>
> 1 - State python3-pip as a dependency and use pip3 to install pysam the
> python3 lib folder;
>
> 2 - Package python3-pysam.
>
>
> I really don't want to have to package another piece of s
Hi all,
I am thinking to go about this in one of two ways:
1 - State python3-pip as a dependency and use pip3 to install pysam the
python3 lib folder;
2 - Package python3-pysam.
I really don't want to have to package another piece of software right now
though.
Do you see any other way to do t
Hi Ghis,
Disabling the tests worked.
The package builds at least, but not lintian clean
.
I'll cary on tomorrow.
Regards,
Jorge
On Mon, Nov 24, 2014 at 5:02 PM, Jorge Sebastião Soares <
j.s.soa...@gmail.com> wrote:
> Hi Ghis
>
> On Mon, Nov 24, 2014 at 4:58 PM, Ghislain Vaillant
> wrote:
>
At worst, can't you just disable the test suite for the Python 3 builds ?
Pybuild should allow to do that easily.
Ghis
2014-11-24 16:36 GMT+00:00 Jorge Sebastião Soares :
> Hi guys,
>
> So essentially the package build halts when it tries to run the test suite:
>
> This is the error I'm getting
Hi Ghis
On Mon, Nov 24, 2014 at 4:58 PM, Ghislain Vaillant
wrote:
> At worst, can't you just disable the test suite for the Python 3 builds ?
> Pybuild should allow to do that easily.
>
Trying that now.
But I would still need to link pysam to the iva package at some point, no?
Regards,
Jorge
Hi guys,
So essentially the package build halts when it tries to run the test suite:
This is the error I'm getting when the pysam module is being imported:
root@debian:~/iva-0.10.0# python3.4 setup.py test
running test
running egg_info
writing top-level names to iva.egg-info/top_level.txt
writin
Piotr,
On Mon, Nov 24, 2014 at 12:26 PM, Piotr Ożarowski wrote:
> [Jorge Sebastião Soares, 2014-11-24]
> > > http://anonscm.debian.org/cgit/debian-med/iva.git/tree/debian/rules
> > >
> > > just a quick look:
> > > * invoking dh_python3 before dh_auto_build doesn't make sense, remove
> this
> > >
[Jorge Sebastião Soares, 2014-11-24]
> > http://anonscm.debian.org/cgit/debian-med/iva.git/tree/debian/rules
> >
> > just a quick look:
> > * invoking dh_python3 before dh_auto_build doesn't make sense, remove this
> > line
> >
>
> So I just let dh_auto_build cal dh_python3 automatically?
dh_au
Hi Piotr,
Thanks for having a look.
On Mon, Nov 24, 2014 at 11:57 AM, Piotr Ożarowski wrote:
> [Jorge Sebastião Soares, 2014-11-24]
> > [1] -
> http://anonscm.debian.org/cgit/debian-med/iva.git/tree/debian/rules
>
> just a quick look:
> * invoking dh_python3 before dh_auto_build doesn't make s
[Jorge Sebastião Soares, 2014-11-24]
> [1] - http://anonscm.debian.org/cgit/debian-med/iva.git/tree/debian/rules
just a quick look:
* invoking dh_python3 before dh_auto_build doesn't make sense, remove this
line
* you'd not need "rm -rf build .pybuild" line if you re-enable
dh_auto_clean
--
P
Forgot to CC debian python:
-- Forwarded message --
From: Jorge Sebastião Soares
Date: Mon, Nov 24, 2014 at 11:31 AM
Subject: Re: [iva] - Python 3 code depends on pysam
To: Debian Med Project List
Hi Bary, all
On Fri, Nov 21, 2014 at 7:29 PM, Barry Warsaw wrote:
> On Nov
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