Re: [Debian-med-packaging] Help to run test suite for python-pysam needed (does not find libhts)

2014-09-25 Thread Andreas Tille
Hi Gert, On Thu, Sep 25, 2014 at 06:13:19PM +0200, Gert Wollny wrote: > I got this: > > Traceback (most recent call last): > File "tests/pysam_test.py", line 15, in > from TestUtils import checkBinaryEqual > ImportError: No module named TestUtils > > and I saw that you had this too befor

Re: [Debian-med-packaging] Help to run test suite for python-pysam needed (does not find libhts)

2014-09-25 Thread Gert Wollny
Hi Andreas, I got this: Traceback (most recent call last): File "tests/pysam_test.py", line 15, in from TestUtils import checkBinaryEqual ImportError: No module named TestUtils and I saw that you had this too before [1], but the answer was missing. How did you solve this? Would the sol

Re: [Debian-med-packaging] Help to run test suite for python-pysam needed (does not find libhts)

2014-09-25 Thread Andreas Tille
Ups, sorry, done. Andreas. On Thu, Sep 25, 2014 at 03:32:49PM +0200, Gert Wollny wrote: > Hi Andreas, > > > I tried to have a look, but ... > > > On Thu, 2014-09-25 at 14:48 +0200, Andreas Tille wrote: > > [1] git://git.debian.org/git/debian-med/python-pysam.git > > > Could you "git push -

Re: [Debian-med-packaging] Help to run test suite for python-pysam needed (does not find libhts)

2014-09-25 Thread Gert Wollny
Hi Andreas, I tried to have a look, but ... On Thu, 2014-09-25 at 14:48 +0200, Andreas Tille wrote: > [1] git://git.debian.org/git/debian-med/python-pysam.git > Could you "git push --all --tags", because git doesn't have the upstream/0.8.0 version tagged. best Gert signature.asc Desc

Re: Help to run test suite for python-pysam needed (does not find libhts)

2014-09-25 Thread Andreas Tille
Hi, in Git[1] I tried to implement the additional hint from upstream https://github.com/pysam-developers/pysam/issues/34 but this does not change anything. :-( Any further help would be welcome Andreas. On Thu, Sep 25, 2014 at 02:48:25PM +0200, Andreas Tille wrote: > Hi, > > I tri

Help to run test suite for python-pysam needed (does not find libhts)

2014-09-25 Thread Andreas Tille
Hi, I tried to upgrade python-pysam[1] but the build endet in a failed test suite: LC_ALL=C.UTF-8 dh_auto_test -- --test --system=custom \ --test-args='set -e; \ cp -a /tmp/buildd/python-pysam-0.8.0/tests {build_dir}/tests ; \ cd {build_dir}/tes