Re: [Debian-med-packaging] C++ help needed for centrifuge

2017-11-26 Thread Alexis Murzeau
Le 27/11/2017 à 00:39, Alexis Murzeau a écrit : > Hi, > > Le 26/11/2017 à 22:01, Fabian Klötzl a écrit : >> Ho, >> >> On 26.11.2017 19:32, Walter Landry wrote: >>> Andreas Tille wrote: Unfortunately I've hit another issue: ... classifier.h:428:54: error: the value of 'rank' is

Re: [Debian-med-packaging] C++ help needed for centrifuge

2017-11-26 Thread Alexis Murzeau
Hi, Le 26/11/2017 à 22:01, Fabian Klötzl a écrit : > Ho, > > On 26.11.2017 19:32, Walter Landry wrote: >> Andreas Tille wrote: >>> Unfortunately I've hit another issue: >>> >>> ... >>> classifier.h:428:54: error: the value of 'rank' is not usable in a constant >>> expression >>>

Re: [Debian-med-packaging] C++ help needed for centrifuge

2017-11-26 Thread Fabian Klötzl
Ho, On 26.11.2017 19:32, Walter Landry wrote: > Andreas Tille wrote: >> Unfortunately I've hit another issue: >> >> ... >> classifier.h:428:54: error: the value of 'rank' is not usable in a constant >> expression >> while((uint8_t)_hitMap[i].rank < rank) { >>

Re: C++ help needed for centrifuge

2017-11-26 Thread Walter Landry
Andreas Tille wrote: > Hi, > > On Sat, Nov 25, 2017 at 01:39:03PM -0800, Walter Landry wrote: >> > In file included from centrifuge_build.cpp:27:0: >> > bt2_idx.h: In static member function 'static std::pair*, >> > Ebwt*> Ebwt::fromStrings(const >> > EList >&, bool, int, int, bool, >> > in

Re: C++ help needed for centrifuge

2017-11-26 Thread Andreas Tille
Hi, On Sat, Nov 25, 2017 at 01:39:03PM -0800, Walter Landry wrote: > > In file included from centrifuge_build.cpp:27:0: > > bt2_idx.h: In static member function 'static std::pair*, > > Ebwt*> Ebwt::fromStrings(const > > EList >&, bool, int, int, bool, > > int32_t, int32_t, int32_t, const st

Re: C++ help needed for centrifuge

2017-11-25 Thread Walter Landry
Andreas Tille wrote: > Hi, > > I started packaging centrifuge[1] and hit a build error which > is most probably caused by gcc-7 incompatibility: > > ... > In file included from centrifuge_build.cpp:27:0: > bt2_idx.h: In static member function 'static std::pair*, > Ebwt*> Ebwt::fromStrings(const

Re: C++ help needed for centrifuge

2017-11-25 Thread Alexis Murzeau
Le 25/11/2017 à 21:56, Andreas Tille a écrit : > Hi, > > I started packaging centrifuge[1] and hit a build error which > is most probably caused by gcc-7 incompatibility: > > ... > In file included from centrifuge_build.cpp:27:0: > bt2_idx.h: In static member function 'static std::pair*, > Ebwt*

C++ help needed for centrifuge

2017-11-25 Thread Andreas Tille
Hi, I started packaging centrifuge[1] and hit a build error which is most probably caused by gcc-7 incompatibility: ... In file included from centrifuge_build.cpp:27:0: bt2_idx.h: In static member function 'static std::pair*, Ebwt*> Ebwt::fromStrings(const EList >&, bool, int, int, bool, in