Re: Packaging SMALT for Debian

2014-04-09 Thread Hannes Ponstingl
; from the distribution (make dist). Binaries are wrapped with python drivers in smalt/test/*_test.py. The harness is the automake 'make check' facility. Please let me know if you nee more help. Kind regards, /Hannes -- Hannes Ponstingl, Ph.D. Sequence Assembly & Analysis Gr

Re: Packaging SMALT for Debian

2014-04-09 Thread Hannes Ponstingl
24PM +0100, Hannes Ponstingl wrote: Thanks for your interest in SMALT. I have cleaned up the test routines for the installation/distribution somewhat with the latest release 0.7.6 which you can download from smalt.sourceforge.net. Yes, this is where we are taking the source from. 1. Since we alwa

Re: Packaging SMALT for Debian

2014-04-09 Thread Hannes Ponstingl
rop the bam_cigar_test.py apropriately from the tests if bambamc is missing. Kind regards Andreas. [1] https://lists.debian.org/debian-med/2014/04/msg00023.html -- Hannes Ponstingl, Ph.D. Sequence Assembly & Analysis Group Tel: +44 (0)1223 834244 x7345 The Wellcome Trust Sa