RFS: r-bioc-affxparser

salsa.debian.org:r-pkg-team/r-bioc-affxparser.git In the queue are oligo and finally ArrayExpress. There is quite some compilation going on for affxparser, so this may well be worth to package. I had found that package only _after_ I had manually addressed the same. Sigh. Steffen

RFS: r-cran-ff

At times I am surprised about what is out there that I was not aware of. A dependency for r-bioc-oligo. https://salsa.debian.org/r-pkg-team/r-cran-ff The package efficiently maps large files  from disk to memory. Many thanks Steffen

Re: RFS: r-cran-ff

Hi, On Thu, 19 Nov 2020 at 23:06, Steffen Möller wrote: > At times I am surprised about what is out there that I was not aware of. > A dependency for r-bioc-oligo. > > https://salsa.debian.org/r-pkg-team/r-cran-ff > > The package efficiently maps large files from disk to memory. > * Added auto

Progress of Snpeff packaging (Was: Re: /usr/bin/picard Re: bcbio will need another while - needs gatk)

Hi, Le 15/11/2020 à 18:16, Andreas Tille a écrit : > >> >> This may be worth a sidenote - bcbio to me is something metaphorical. We >> have it in the distribution already. And now we work to get all the >> runtime-dependencies in to make it functional. And snpEff is pretty high >> up (it interpre

Re: RFS: r-cran-ff

Hi Nilesh, On 19.11.20 20:18, Nilesh Patra wrote: > > On Thu, 19 Nov 2020 at 23:06, Steffen Möller > wrote: > > At times I am surprised about what is out there that I was not > aware of. > A dependency for r-bioc-oligo. > > https://salsa.debian.org/r