Re: Anybody volunteering to try to save falcon in Debian (Was: Bug#936503: falcon: Python2 removal in sid/bullseye)

2020-06-15 Thread Andreas Tille
Control: tags -1 upstream Control: forwarded -1 https://github.com/PacificBiosciences/FALCON_unzip/issues/160 Antoni, thanks for opening the issue, Andreas. -- http://fam-tille.de

Re: ksw2 library - nobody else at it, right?

2020-06-15 Thread Andreas Tille
Hi again, anybody up for contacting upstream as a first step? Kind regards Andreas. On Tue, Jun 09, 2020 at 05:28:28PM +0200, Andreas Tille wrote: > Hi, > > is anybody up for this challenge? This is needed for the minimap2 > Python module which we need for other packages. > > Kind regar

Re: [covid-19] Help for ocaml package needed

2020-06-15 Thread Andreas Tille
Hi again, I've added Pierre Boutillier to CC since he once had made some progress[3] with this package. What I've done is the following: 1. Asked ftpmaster for fastprocessing of mcl to enable a smoother access to the ocaml bindings of mcl 2. Tried to build pplacer with a local copy of

Re: PhyML error - does that ring any bell? Re: RFS: python-biopython

2020-06-15 Thread merkys
On 2020-06-12 20:40, Steffen Möller wrote: > I found this > > Bio.PDB.mmtf docstring test ... skipped, missing Python dependency > Bio.PDB.mmtf.DefaultParser docstring test ... skipped, missing Python > dependency > Bio.PDB.mmtf.mmtfio docstring test ... skipped, missing Python dependency > > to s

[RFS] readucks

2020-06-15 Thread Nilesh Patra
Hi, I've packaged a NEW module: readucks - a Nanopore read de-multiplexer. It builds in a clean chroot with passing tests. I've pushed my changes to team-repo[1]. This needs review and sponsorship. [1]: https://salsa.debian.org/med-team/readucks Thanks and regards Nilesh

Re: [RFS] readucks

2020-06-15 Thread Andreas Tille
Hi Nilesh, Uploaded to new and added to the new request for ftpmaster. Thanks for your work on this Andreas. On Mon, Jun 15, 2020 at 08:02:21PM +0530, Nilesh Patra wrote: > Hi, > I've packaged a NEW module: readucks - a Nanopore read de-multiplexer. > It builds in a clean chroot with pass

Re: [RFS] readucks

2020-06-15 Thread Nilesh Patra
On Mon, 15 Jun 2020, 22:30 Andreas Tille, wrote: > Hi Nilesh, > > Uploaded to new and added to the new request for ftpmaster. Thanks a lot! :-) > >