RFS: libsmithwaterman

2020-05-22 Thread Pranav Ballaney
Hi, I've added autopkgtests to libsmithwaterman. Please review and sponsor. https://salsa.debian.org/med-team/libsmithwaterman Regards, Pranav ᐧ

sonLib - anyone working with it, addressed packaging?!?

2020-05-22 Thread Steffen Möller
Hello, https://github.com/ComparativeGenomicsToolkit/sonLib should be the same as / cleaned-up version of https://github.com/benedictpaten/sonLib which I need to address the packaging of https://github.com/benedictpaten/marginPhase which again is needed for some recent fancy Nanopore assembler

Re: Statistics::PCA and friends

2020-05-22 Thread gregor herrmann
On Thu, 21 May 2020 19:12:23 +0200, Étienne Mollier wrote: > > I'd love to switch to dpt but its always so hard to switch from > > "something that works" to "something that might work a bit differen but > > its state of the art". I would welcome if someone would check our > > scripts and turn the

Re: sonLib - anyone working with it, addressed packaging?!?

2020-05-22 Thread Michael Crusoe
On Fri, May 22, 2020 at 5:30 PM Steffen Möller wrote: > Hello, > > https://github.com/ComparativeGenomicsToolkit/sonLib should be the same > as / cleaned-up version of > https://github.com/benedictpaten/sonLib The later is currently a code copy in https://tracker.debian.org/pkg/vg It is also no

Re: RFS: libsmithwaterman

2020-05-22 Thread Andreas Tille
Hi Pranav, On Fri, May 22, 2020 at 08:09:42PM +0530, Pranav Ballaney wrote: > I've added autopkgtests to libsmithwaterman. > Please review and sponsor. > > https://salsa.debian.org/med-team/libsmithwaterman Uploaded. Thanks a lot for your work on this, Andreas. -- http://fam-tille.de

https://salsa.debian.org/med-team/community/2020-covid19-hackathon/-/wikis/2nd-Covid-19-Hackathon

2020-05-22 Thread Steffen Möller
Hello, We had a nice and friendly Debian Med Covid-19 fireside this, well, "evening" my time. Quite some of us felt prepared to invest their time into a revisited Covid-19 Sprint. On https://salsa.debian.org/med-team/community/2020-covid19-hackathon/-/wikis/2nd-Covid-19-Hackathon I put my rec