Re: [MoM] Packaging of python-csb - report #3

2012-11-02 Thread Laszlo Kajan
-BEGIN PGP SIGNED MESSAGE- Hash: SHA1 Hello Tomas! I see from the mails you've made very nice progress. dh is great, and with the help of a tutor progress can indeed be very fast. Is this a pure Python module or extension? - just curious. >> Once these issues are fixed I consider the p

Re: [MoM] Packaging of python-csb - report #3

2012-11-02 Thread Andreas Tille
On Fri, Nov 02, 2012 at 01:17:20AM +0100, Tomás Di Domenico wrote: > > Fine. The ITP is OK in general. As a hint for the future: It is a > > good idea to add a hint that the package is maintained in the Debian Med > > team and it also does not harm to mention the Vcs-Git information where > > yo

Re: Packaging Ray for Debian Med

2012-11-02 Thread Andreas Tille
Hi Sébastien, many thanks for your work and for your interest into Debian Med. On Fri, Nov 02, 2012 at 12:08:23AM -0400, Sébastien Boisvert wrote: > [I posted this already, but before confirming my subscription] (Remark: you do not necessarily need to subscribe the list to be able to post - but

Re: InVesalius 3 Beta

2012-11-02 Thread Andreas Tille
Hi Thiago, On Thu, Nov 01, 2012 at 03:35:10PM -0200, Thiago Franco Moraes wrote: > > I've just created the first package to ca_smoothing. The package name is > python-casmoothing. > > dget -x > http://dl.dropbox.com/u/817671/packages/packaging/python-casmoothing/python-casmoothing_0.1%7Egit357bb

Re: Packaging Ray for Debian Med

2012-11-02 Thread Sébastien Boisvert
Hi Andreas, I have a Alioth account (sboisvert-guest). I have read the policy and I will use git://git.debian.org/git/debian-med/ray.git However, I have not found how I can create this Debian-hosted git repository. On 11/02/2012 05:12 AM, Andreas Tille wrote: Hi Sébastien, many thanks

Re: Packaging Ray for Debian Med

2012-11-02 Thread Olivier Sallou
Le 11/2/12 2:58 PM, Sébastien Boisvert a écrit : > Hi Andreas, > > I have a Alioth account (sboisvert-guest). > > I have read the policy and I will use > > git://git.debian.org/git/debian-med/ray.git > > However, I have not found how I can create this Debian-hosted > git repository. You have

Re: Packaging Ray for Debian Med

2012-11-02 Thread Sébastien Boisvert
Thanks ! This is exactly what I was looking for. On 11/02/2012 10:09 AM, Olivier Sallou wrote: Le 11/2/12 2:58 PM, Sébastien Boisvert a écrit : Hi Andreas, I have a Alioth account (sboisvert-guest). I have read the policy and I will use git://git.debian.org/git/debian-med/ray.git Howe

Re: Packaging Ray for Debian Med

2012-11-02 Thread Sébastien Boisvert
Thanks Tim, I merged your patch. I will restructure my files according to the Debian git policy. (I am reading it right now). I added my SSH key so I will get access in less than 1 hour. The Debian project is really organized, I like that a lot ! For ray debian/2.1.0-3, I will do these 4 thi

Re: Packaging Ray for Debian Med

2012-11-02 Thread Andreas Tille
Hi, On Fri, Nov 02, 2012 at 12:42:23PM -0400, Sébastien Boisvert wrote: > The Debian project is really organized, I like that a lot ! :-) > For ray debian/2.1.0-3, I will do these 4 things: > > 1. Add Tim Booth for the packaging copyright I would also suggest to add him in debian/control as f

Re: Packaging Ray for Debian Med

2012-11-02 Thread Sébastien Boisvert
Hi ! The Ray Debian package is now at http://anonscm.debian.org/gitweb/?p=debian-med/ray.git;a=summary I fixed everything that lintian reported except these: W: ray-extra: unusual-interpreter ./usr/share/ray/scripts/plot-color-distributions.R #!/usr/bin/Rscript W: ray-extra: unusual-interprete

Re: Packaging Ray for Debian Med

2012-11-02 Thread Sébastien Boisvert
Hi ! The Ray Debian package is now at http://anonscm.debian.org/gitweb/?p=debian-med/ray.git;a=summary I fixed everything that lintian reported except these: W: ray-extra: unusual-interpreter ./usr/share/ray/scripts/plot-color-distributions.R #!/usr/bin/Rscript W: ray-extra: unusual-interprete

Tophat 2.0.6 is ready for upload

2012-11-02 Thread Carlos Borroto
Hi, New version Tophat 2.0.6 is ready for upload. I used debian/get-orig-source to make sure SeqAn was removed correctly. This is a bug fix realease. Upstream changelog: TopHat 2.0.6 release 11/02/2012 Version 2.0.6 is a maintenance release addressing some issues found in the 2.0.5 release: - cor

Bowtie2 ready for upload?

2012-11-02 Thread Carlos Borroto
Hi, I uploaded latest upstream version for Bowtie2, which dropped the beta tag. The package seems ready, but I haven't worked in this package before. Alex, could you please take a look and see if things look good. Thanks, Carlos -- To UNSUBSCRIBE, email to debian-med-requ...@lists.debian.org w