Re: vienna-rna is almost ready

2011-02-04 Thread Alex Mestiashvili
On 02/03/2011 06:21 PM, Karsten Hilbert wrote: $lintian vienna-rna_1.8.4-1_amd64.deb W: vienna-rna: binary-without-manpage usr/bin/ct2b W: vienna-rna: binary-without-manpage usr/bin/dpzoom W: vienna-rna: binary-without-manpage usr/bin/popt "popt" sounds like an awfully generic name for a b

GIMIAS

2011-02-04 Thread Sebastian Hilbert
You might consider adding http://sourceforge.net/projects/gimias/ Sebastian -- To UNSUBSCRIBE, email to debian-med-requ...@lists.debian.org with a subject of "unsubscribe". Trouble? Contact listmas...@lists.debian.org Archive: http://lists.debian.org/201102041009.41624.sebastian.hilb...@gmx.n

Re: GIMIAS

2011-02-04 Thread Mathieu Malaterre
This app looks very impressive. Now on the downside, here is the list of convenient libs used: ANN/ BOOST-1.45.0/ CGNS/ CMakeLists.txt cmakeMacros/ CMGUI/ CXXTEST/ DCMTK-3.5.4/ EXPAT/ HDF5/ ITK-3.20/ LIBELF/ LOG4CPLUS/ MITK_SVN2/ NETGEN-4.5/ PCRE-8.01/ SLICER/ SLICERAPPS/ TinyXml/ VTK-5.6.1/ WXMA

Re: vienna-rna is almost ready

2011-02-04 Thread Andreas Tille
On Fri, Feb 04, 2011 at 08:59:37AM +0100, Alex Mestiashvili wrote: >> "popt" sounds like an awfully generic name for a binary. > > apt-file doesn't show that such name is in use , except libpopt which > is different thing . Despite the fact that technically we do not have a conflict in name spa

Re: Bug#611828: ITP: probalign -- multiple sequence alignment using partition function posterior probabilities

2011-02-04 Thread Andreas Tille
Hi Tanguy, On Fri, Feb 04, 2011 at 10:33:05AM +0100, Tanguy Ortolo wrote: > Le mercredi 02 février 2011, andr...@an3as.eu a écrit : > > Description : multiple sequence alignment using partition function > > posterior probabilities > > Is that about DNA sequences? I think this should be exp

dcmtk 3.6.0 progress

2011-02-04 Thread Mathieu Malaterre
All, I would appreciate if a DD would upload the updated dcmtk 3.6.0 package to experimental, this would help me finish up the work for the transition (so that packager of the following packages can help me out). Here is the situation: - dicomscope does not build (*), I contacted upstream for

Re: dcmtk 3.6.0 progress

2011-02-04 Thread Andreas Tille
On Fri, Feb 04, 2011 at 12:35:55PM +0100, Mathieu Malaterre wrote: > I would appreciate if a DD would upload the updated dcmtk 3.6.0 > package to experimental, this would help me finish up the work for the > transition (so that packager of the following packages can help me > out). Please give s

Re: Bug#609038: ITP: biomaj -- package is ready is svn

2011-02-04 Thread Olivier Sallou
Hi Andreas, Biomaj is at least ok, the SVN issue has been fixed and I successfully generated the package with svn anonymous access. I created a script get-orig-source in debian dir. It should be launched from "root" directory of the package to create .orig.tar.gz Both biomaj and biomaj-watch

Re: dcmtk 3.6.0 progress

2011-02-04 Thread Mathieu Malaterre
On Fri, Feb 4, 2011 at 12:40 PM, Andreas Tille wrote: > On Fri, Feb 04, 2011 at 12:35:55PM +0100, Mathieu Malaterre wrote: >>   I would appreciate if a DD would upload the updated dcmtk 3.6.0 >> package to experimental, this would help me finish up the work for the >> transition (so that packager

package: gnumed-client

2011-02-04 Thread Sebastian Hilbert
Hi, In gnumed-client please change recommends gnumed-server >=v13 to v14 as GNUmed 0.8.x series needs a v14 database. For the upcoming GNUmed 0.9 this would have to be changed to v15 Fixing this in the next upload is sufficient I guess. Sebastian -- To UNSUBSCRIBE, email to debian-med-requ

Re: package: gnumed-client

2011-02-04 Thread Andreas Tille
On Fri, Feb 04, 2011 at 01:34:51PM +0100, Sebastian Hilbert wrote: > In gnumed-client please change > recommends gnumed-server >=v13 to v14 as GNUmed 0.8.x series needs a v14 > database. Fixed in SVN. > For the upcoming GNUmed 0.9 this would have to be changed to v15 Will the next to-be-uploa

Re: package: gnumed-client

2011-02-04 Thread Sebastian Hilbert
On Friday 04 February 2011 13:50:51 Andreas Tille wrote: > On Fri, Feb 04, 2011 at 01:34:51PM +0100, Sebastian Hilbert wrote: > > In gnumed-client please change > > recommends gnumed-server >=v13 to v14 as GNUmed 0.8.x series needs a v14 > > database. > > Fixed in SVN. > > > For the upcoming GNUm

Re: package: gnumed-client

2011-02-04 Thread Karsten Hilbert
> > For the upcoming GNUmed 0.9 this would have to be changed to v15 > > Will the next to-be-uploaded package 0.8.x or 0.9? I would expect another 0.8.x before 0.9.0. Karsten -- NEU: FreePhone - kostenlos mobil telefonieren und surfen! Jetzt informieren: http://www.gmx.n

Re: dcmtk 3.6.0 progress

2011-02-04 Thread Andreas Tille
On Fri, Feb 04, 2011 at 12:35:55PM +0100, Mathieu Malaterre wrote: > All, > > I would appreciate if a DD would upload the updated dcmtk 3.6.0 > package to experimental, this would help me finish up the work for the > transition (so that packager of the following packages can help me > out). Fil

Re: dcmtk 3.6.0 progress

2011-02-04 Thread Mathieu Malaterre
On Fri, Feb 4, 2011 at 4:39 PM, Andreas Tille wrote: > On Fri, Feb 04, 2011 at 12:35:55PM +0100, Mathieu Malaterre wrote: >> All, >> >>   I would appreciate if a DD would upload the updated dcmtk 3.6.0 >> package to experimental, this would help me finish up the work for the >> transition (so that

Bug #611927: ITP: maude -- a high-performance logical framework

2011-02-04 Thread Scott Christley
I tried adding the X-Debbugs-CC tag in my ITP, but I don't think it worked, the email I sent is below anybody know what I'm doing wrong? Scott Begin forwarded message: > From: Scott Christley > Date: February 3, 2011 3:00:56 PM CST > To: sub...@bugs.debian.org > Subject: ITP: maude -- a high-p

Re: dcmtk 3.6.0 progress

2011-02-04 Thread Andreas Tille
On Fri, Feb 04, 2011 at 04:42:18PM +0100, Mathieu Malaterre wrote: > > --> does not install. > > I would have fixed this but I have no idea in which package these files > > reasonably belong to. > > they *now* belong to libdcmtk2. I do not understand my mistake (and I > did not even realize there

Re: Bug #611927: ITP: maude -- a high-performance logical framework

2011-02-04 Thread Charles Plessy
Le Fri, Feb 04, 2011 at 10:40:51AM -0600, Scott Christley a écrit : > I tried adding the X-Debbugs-CC tag in my ITP, but I don't think it worked, > the email I sent is below anybody know what I'm doing wrong? Hi Scott, X-Debbugs-CC is not a tag but a pseudo-header, so I think that it has to be pl