Attempt to remove treetool

2009-10-06 Thread Andreas Tille
Hi, after having updated several of our packages I try to target at removal candidates. When trying to take a screeshot - hey, anybody elso who wants to support Debian Med by doing screenshots??? - from treetool I realised that any action freezes my X server. I had to switch to console and kill

Re: Status of BioRuby

2009-10-06 Thread Naohisa GOTO
Hi, I'm an upstream author of BioRuby. On Mon, 5 Oct 2009 19:56:10 +0200 Andreas Tille wrote: > Well, BioRuby was not updated for a long time and nobody complained > until now. So the upload does not seem to be urgent. But we will have > a Debian freeze in December (at least this is the plan)

Re: Status of BioRuby

2009-10-06 Thread Andreas Tille
On Tue, Oct 06, 2009 at 06:10:13PM +0900, Naohisa GOTO wrote: > I'm an upstream author of BioRuby. Thanks for contacting Debian Med about this. > There were a complain in BioRuby mailing list. > http://lists.open-bio.org/pipermail/bioruby/2009-April/000893.html So this would give one more point

Status of axparafit (ITP #463219)

2009-10-06 Thread Andreas Tille
Hi, locking at Vcs-Svn: svn://svn.debian.org/svn/debian-med/trunk/packages/axparafit David has finished the package which closes #463219 and changelog says "Wed, 30 Jan 2008 11:52:11 +0100". But there is no visible sign of this package. If there is nothing I might have overlooked I would u

Tkmelting for Debian

2009-10-06 Thread Charles Plessy
Le Thu, Oct 01, 2009 at 10:05:57PM +0200, Andreas Tille a écrit : > > the Debian Med team has packaged melting for Debian - at least the > versions < 5. We now are considering to package the latest version and Dear Nicolas and Marine, I would like to add to what Andreas already wrote that we e

Re: Status of BioRuby

2009-10-06 Thread Naohisa GOTO
On Tue, 6 Oct 2009 12:11:10 +0200 Andreas Tille wrote: > On Tue, Oct 06, 2009 at 06:10:13PM +0900, Naohisa GOTO wrote: > > I'm an upstream author of BioRuby. > > Thanks for contacting Debian Med about this. > > > There were a complain in BioRuby mailing list. > > http://lists.open-bio.org/pipe

Re: Status of BioRuby

2009-10-06 Thread Andreas Tille
On Tue, Oct 06, 2009 at 08:05:59PM +0900, Naohisa GOTO wrote: > Yes. I'm also a debian user, and I'm glad if I can help. Ahh, that's really great. One word beforehand and to everybody (perhaps I'll compose a separate mail as well): Please install the package popularity-contest and answer the ques

Maintaining praat in Debian Med team?

2009-10-06 Thread Andreas Tille
Hi Rafael, your package praat was included in the Psychology task of the Debian Med Blend[1]. I realised that the packaged version is some minor versions behind upstream (Debian has 5.1.7, upstream has 5.1.17). I wonder whether this has some technical reason or whether you might struggle with ot

Re: Maintaining praat in Debian Med team?

2009-10-06 Thread Andreas Tille
Sorry for answering my own mail: An alternative option for team maintenance might be Experimental Psychology Maintainers for sure - but this team might comment on this themselves. Kind regards Andreas. On Tue, Oct 06, 2009 at 03:54:54PM +0200, Andreas Tille wrote: > Hi Rafael,

Re: Maintaining praat in Debian Med team?

2009-10-06 Thread Michael Hanke
Hi, On Tue, Oct 06, 2009 at 03:58:53PM +0200, Andreas Tille wrote: > Sorry for answering my own mail: > > An alternative option for team maintenance might be > >Experimental Psychology Maintainers > > > for sure - but this team might comment on this themselves. If there is need for a

Re: Maintaining praat in Debian Med team?

2009-10-06 Thread Andreas Tille
On Tue, Oct 06, 2009 at 10:29:02AM -0400, Michael Hanke wrote: > Hi, > > On Tue, Oct 06, 2009 at 03:58:53PM +0200, Andreas Tille wrote: > > Sorry for answering my own mail: > > > > An alternative option for team maintenance might be > > > >Experimental Psychology Maintainers > > > > > >

Re: kalign: Please enable bash-completion

2009-10-06 Thread Andreas Tille
Hi David, once you provided a patch which solves this problem. Unfortunately I'm not positively sure, how to apply this. Would you mind injecting it into the just updated packaging to let us finish the kalign packaging and fix all open bugs? Kind regards Andreas. -- http://fam-tille.de

Re: kalign: Please enable bash-completion

2009-10-06 Thread Andreas Tille
On Tue, Oct 06, 2009 at 04:52:17PM +0200, Andreas Tille wrote: > once you provided a patch which solves this problem. Unfortunately I'm > not positively sure, how to apply this. Would you mind injecting it into > the just updated packaging to let us finish the kalign packaging and fix > all open

Re: Attempt to remove treetool

2009-10-06 Thread Charles Plessy
Le Tue, Oct 06, 2009 at 09:50:16AM +0200, Andreas Tille a écrit : > > after having updated several of our packages I try to target at removal > candidates. When trying to take a screeshot - hey, anybody elso who > wants to support Debian Med by doing screenshots??? - from treetool I > realised th

Please review the copyright file of bwa.

2009-10-06 Thread Charles Plessy
user debian-le...@lists.debian.org usetags 548719 copyright-review-requested thanks Dear all, in order to lower our rejection rate from the new queue, I propose to do more systematically peer-review of Debian copyright files before the upload of new packages. I proposed a method in the following

Re: Attempt to remove treetool

2009-10-06 Thread Andreas Tille
On Wed, Oct 07, 2009 at 01:40:23PM +0900, Charles Plessy wrote: > But I am all for removing treetool. OK. > With NJplot being a bit superseded by the lastest SeaView, that unfortunately > non-free now, and TreeView X being in difficulty because it does not compile > with latest wxwidgets, we may

Re: Please review the copyright file of bwa.

2009-10-06 Thread Andreas Tille
On Wed, Oct 07, 2009 at 02:20:13PM +0900, Charles Plessy wrote: > Could anybody have a look at its Debian copyright file? In exchange, I will > review dicomscope. I had a look and do not have any additions regarding the content. However I'm curious about the formatting. If the copyright informati