Re: Upgrading biojava-live from 1.7 to 1.9

2022-03-28 Thread Pierre Gruet
Hi Olivier, Andreas, Steffen, Le 28/03/2022 à 17:54, Steffen Möller a écrit : On 28.03.22 17:15, Andreas Tille wrote: Am Mon, Mar 28, 2022 at 04:42:15PM +0200 schrieb olivier sallou: ... that's fine for me Thanks a lot for this effort Many thanks - brings some memories back! Steffen Th

Re: Upgrading biojava-live from 1.7 to 1.9

2022-03-28 Thread Steffen Möller
On 28.03.22 17:15, Andreas Tille wrote: Am Mon, Mar 28, 2022 at 04:42:15PM +0200 schrieb olivier sallou: ... that's fine for me Thanks a lot for this effort Many thanks - brings some memories back! Steffen

Re: Upgrading biojava-live from 1.7 to 1.9

2022-03-28 Thread Andreas Tille
Am Mon, Mar 28, 2022 at 04:42:15PM +0200 schrieb olivier sallou: > ... > that's fine for me Thanks a lot for this effort Andreas. -- http://fam-tille.de

Re: Upgrading biojava-live from 1.7 to 1.9

2022-03-28 Thread olivier sallou
Le lun. 28 mars 2022 à 16:24, Pierre Gruet a écrit : > > Hello everyone, > > Recently I worked on biojava-live (locally, pushed nothing to Salsa), > which currently has version 1.7.1. Upstream is active and published > version 1.9.5 of this "legacy" biojava,

Upgrading biojava-live from 1.7 to 1.9

2022-03-28 Thread Pierre Gruet
Hello everyone, Recently I worked on biojava-live (locally, pushed nothing to Salsa), which currently has version 1.7.1. Upstream is active and published version 1.9.5 of this "legacy" biojava, which is still used by many software: four reverse dependencies in Debian (alien-hunte

biojava-live

2018-11-12 Thread Olivier Sallou
Hi Andreas, I see you added some commits to set biojava to v8 to fix the corba issue. However you did not upload the package yet. As it is set to autoremoval due to this bug, is there any reason you did not upload new package? Olivier -- gpg key id: 4096R/326D8438 (keyring.debian.org) Key

Re: biojava-live (1.7) does not build with OpenJDK 11: package com.sun.corba.se.spi.legacy.connection does not exist

2018-11-04 Thread Andreas Tille
On Sun, Nov 04, 2018 at 08:37:32AM +0100, Olivier Sallou wrote: > > Biojava is quite old (recent is biojava 4), and kept mainly for compatibility > i think. Yes, I know. > As suggested by emmanuel, maybe easiest would be to patch out corba related > stuff (is there any corba service still run

Re: biojava-live (1.7) does not build with OpenJDK 11: package com.sun.corba.se.spi.legacy.connection does not exist

2018-11-04 Thread Olivier Sallou
- Andreas Tille a écrit : > Hi, > > I tried to polish the packaging of biojava-live and was running into: Biojava is quite old (recent is biojava 4), and kept mainly for compatibility i think. As suggested by emmanuel, maybe easiest would be to patch out corba related stuff

Re: biojava-live (1.7) does not build with OpenJDK 11: package com.sun.corba.se.spi.legacy.connection does not exist

2018-11-03 Thread Andreas Tille
Control: tags -1 help Hi On Fri, Nov 02, 2018 at 12:25:20AM +0100, Emmanuel Bourg wrote: > Hi Andreas, > > On 01/11/2018 07:20, Andreas Tille wrote: > > > [javac] > > /build/biojava-live-1.7.1/src/org/biojava/bio/structure/PDBHeader.java

Re: biojava-live (1.7) does not build with OpenJDK 11: package com.sun.corba.se.spi.legacy.connection does not exist

2018-11-01 Thread Emmanuel Bourg
Hi Andreas, On 01/11/2018 07:20, Andreas Tille wrote: > [javac] > /build/biojava-live-1.7.1/src/org/biojava/bio/structure/PDBHeader.java:10: > error: package com.sun.corba.se.spi.legacy.connection does not exist > [j

biojava-live (1.7) does not build with OpenJDK 11: package com.sun.corba.se.spi.legacy.connection does not exist

2018-10-31 Thread Andreas Tille
Hi, I tried to polish the packaging of biojava-live and was running into: ... [javac] /build/biojava-live-1.7.1/src/org/biojava/bio/structure/PDBHeader.java:10: error: package com.sun.corba.se.spi.legacy.connection does not exist [javac] import

Bug#659824: biojava-live: New version available

2012-02-13 Thread Andreas Tille
Package: biojava-live Severity: minor There is a much newer version available as the packaged version. The debian/watch file now regards http://biojava.org/wiki/BioJava:Download Please raise your voice if there is any reason to keep the old version. Kind regards Andreas