Re: [Help] librostlab-blast fails its autopkgtest with C++ issue

Andreas Tille writes: > However, what I do not understand is that the build of > librg-blast-parser-perl remains on failing[1] (versioned Build-Depends on > fixed librostlab-blast0-dev was set): Looks like fallout from a clash between Perl headers' definition of YYEMPTY as a macro and Rost Lab h

Re: [Help] librostlab-blast fails its autopkgtest with C++ issue

Hi Aaron, Am Sun, Jan 23, 2022 at 04:26:20PM -0500 schrieb Aaron M. Ucko: > > Please try adjusting the test script to list parseblast.cpp ahead of the > -l flags; now that --as-needed is in effect by default, the linker > otherwise discards the libraries as not needed at the time of their > appea

Re: [Help] librostlab-blast fails its autopkgtest with C++ issue

Andreas Tille writes: > /usr/bin/ld: /tmp/ccv6wJk4.o: in function `main': > parseblast.cpp:(.text+0x7c): undefined reference to > `rostlab::blast::parser_driver::parse(bool, bool)' Please try adjusting the test script to list parseblast.cpp ahead of the -l flags; now that --as-needed is in effe

Re: [Help] librostlab-blast fails its autopkgtest with C++ issue

Hi Aaron, Am Sun, Jan 23, 2022 at 12:10:05AM -0500 schrieb Aaron M. Ucko: > Andreas Tille writes: > > > Any idea how to fix > [...] > > [1] https://salsa.debian.org/med-team/librostlab-blast/-/jobs/2383360 > > Please try the attached patch, which eliminates the need to force an old > C++ standa

Re: [Help] librostlab-blast fails its autopkgtest with C++ issue

Andreas Tille writes: > Any idea how to fix [...] > [1] https://salsa.debian.org/med-team/librostlab-blast/-/jobs/2383360 Please try the attached patch, which eliminates the need to force an old C++ standard version (which this package can't expect callers to use) in debian/rules. -- Aaron M.