Please review ncbi-vdb (Was: Cmake help needed for ncbi-vdb)

Hi, Am Thu, Feb 24, 2022 at 09:14:31AM +0100 schrieb Mathieu Malaterre: > I've pushed 25ca2396895c15afe738b9209b1c350da18847ca > > If I understand the original upstream code, this should be the right fix. Thanks a lot Mathieu. This was extremely helpful! I managed the packaging now at the stat

Re: Cmake help needed for ncbi-vdb

On Wed, Feb 23, 2022 at 6:30 PM Andreas Tille wrote: > > Hi Mathieu, > > Am Wed, Feb 23, 2022 at 05:57:55PM +0100 schrieb Mathieu Malaterre: > > > Unfortunately the build is not yet correct since the -soname options > > > included into the build are wrong. For instance the compile option that > >

Re: Cmake help needed for ncbi-vdb

Hi Mathieu, Am Wed, Feb 23, 2022 at 05:57:55PM +0100 schrieb Mathieu Malaterre: > > Unfortunately the build is not yet correct since the -soname options > > included into the build are wrong. For instance the compile option that > > is generated is in the current configuration for instance: > > >

Re: Cmake help needed for ncbi-vdb

On Wed, Feb 23, 2022 at 5:26 PM Andreas Tille wrote: > > Hi Mathieu, > > Am Mon, Feb 21, 2022 at 09:29:46AM +0100 schrieb Mathieu Malaterre: > > > The point is that the linker flags to libmbedtls-dev, zlib and others > > > need to be set. Excluding references to code copies was easy[2] ... but >

Re: Cmake help needed for ncbi-vdb

Andreas Tille writes: > but for some reason this does not have any effect. Do you have any > idea how to set SONAME correctly? I'm not sure offhand, but FWIW I already filed an internal bug report on the lack of versioned SONAMEs; I'll pass along any patches that crop up. Mathieu, you have my

Re: Cmake help needed for ncbi-vdb

Hi Mathieu, Am Mon, Feb 21, 2022 at 09:29:46AM +0100 schrieb Mathieu Malaterre: > > The point is that the linker flags to libmbedtls-dev, zlib and others > > need to be set. Excluding references to code copies was easy[2] ... but > > now we need the according -l options and my cmake knowledge is

Re: Cmake help needed for ncbi-vdb

Andreas, On Sun, Feb 20, 2022 at 8:25 AM Andreas Tille wrote: > > Hi, > > I think I need some cmake help for ncbi-vdb. In former versions > ncbi-vdb came with a hand-crafted build system. Now cmake is provided > alternatively which is a great progress IMHO since that hand-crafted > system alway

Cmake help needed for ncbi-vdb

Hi, I think I need some cmake help for ncbi-vdb. In former versions ncbi-vdb came with a hand-crafted build system. Now cmake is provided alternatively which is a great progress IMHO since that hand-crafted system always created issues for every new version. I started using cmake but its not fi