Re: ClonalFrameML: Dataset with less computational resourses

2024-01-31 Thread Komolehin Israel
github repository. > > Best wishes, > Xavier > > On Mon, 29 Jan 2024 at 17:35, Komolehin Israel > wrote: > >> Hi Xavier, >> >> > The license is the same as for ClonalFrameML itself, ie GPL-3.0. >> Great. Thank you. >> >> > Would it be u

Re: ClonalFrameML: Dataset with less computational resourses

2024-01-29 Thread Komolehin Israel
Xavier Didelot wrote: > Hi Israel, > > The license is the same as for ClonalFrameML itself, ie GPL-3.0. > Would it be useful for you if I added these files to the github repository? > > Best wishes, > Xavier > > On Mon, 29 Jan 2024 at 16:24, Komolehin Israel > wrote:

Re: ClonalFrameML: Dataset with less computational resourses

2024-01-29 Thread Komolehin Israel
The command > ClonalFrameML test.nwk test.fasta out > will take less than a second to run. > > Best wishes, > Xavier > > On Mon, 29 Jan 2024 at 10:20, Komolehin Israel > wrote: > >> Hi Xavier, >> >> I hope this email finds you well. I'm curren

ClonalFrameML: Dataset with less computational resourses

2024-01-29 Thread Komolehin Israel
Hi Xavier, I hope this email finds you well. I'm currently involved in QA testing for med-team packages, including ClonalFrameML. We've encountered a challenge with the dataset provided upstream, which requires around 12 hours of computing. To streamline our testing process, would it be possible

Outreachy Contribution

2023-12-31 Thread Komolehin Israel
Hi Team, My name is Israel, an Outreachy intern under the mentorship program of Andreas Tille and Nilesh Patra which started on December 4th, 2023. Here is the list of the packages I have contribute to: Amide Busco Nipy Nitime Pique Python-iow Qcumber Xpore It has been a wonderful journey so fa

Re: Xpore Autopkgtest Review ( Bug #1035276 )

2023-12-29 Thread Komolehin Israel
> On Fri, 29 Dec 2023 at 1:36 PM, Nilesh Patra wrote: > On Fri, Dec 29, 2023 at 05:57:13PM +0530, Nilesh Patra wrote: > > Hi Israel, > > > > On Fri, Dec 29, 2023 at 01:01:47PM +0100, Komolehin Israel wrote: > > > I worked on the Xpore package by providing

Xpore Autopkgtest Review ( Bug #1035276 )

2023-12-29 Thread Komolehin Israel
Hi Team, I worked on the Xpore package by providing autopkgtest and embedding test data. CI was successful. This closes #1035276 bug. I look forward to its review and upload. Regards, Israel.

Re: Pique #986194 Bug closing

2023-12-23 Thread Komolehin Israel
On Wed, Dec 13, 2023 at 1:40 AM Tony Travis < tony.tra...@minke-informatics.co.uk> wrote: > On 13/12/2023 00:16, Tony Travis wrote: > > On 12/12/2023 19:29, Komolehin Israel wrote: > >> Hi Team, > >> > >> I worked on Pique package by providing autopkg

Python-iow Autopkgtest Review (Bug #1035258)

2023-12-23 Thread Komolehin Israel
Hi Team, I worked on Python-iow package by providing autopkgtest and providing a patch to fix some issues with the upstream test. CI was successful. I would like this package to be reviewed as the test fails with Python3.12. I have provided a readme in debian/tests to document the source of the t

Pique #986194 Bug closing

2023-12-12 Thread Komolehin Israel
Hi Team, I worked on Pique package by providing autopkgtest and providing a patch to fix the smartpca command that blocks the upstream test from running successfully. CI was successful. This closes #986194 bug. I look forward to review and upload. Regards, Israel.

Orthanc Integration Test using Orthanc-wsi

2023-10-20 Thread Komolehin Israel
Hi Sebastian, I created autopkgtests for Orthanc and Orthanc-wsi. Orthanc has been uploaded to unstable however Is it fine to update orthanc package’s autopkgtest with an integration test using orthanc-wsi ? Regards, Israel