Re: Honourable Mention

2021-06-08 Thread James Procter (Staff)
Nice one Daniel 🙂 and thanks Tony for posting ! > https://helloworld.raspberrypi.org/issues/16 j. The University of Dundee is a registered Scottish Charity, No: SC015096

Re: [RFS] jalview

2021-02-07 Thread James Procter (Staff)
Hi Nilesh/Pierre It looks like the malloc-fail is due to jalview trying to grab as much memory as possible on start up. That might need to be controlled for testing, since the tests need at most 512MB. @Pierre - should be simply a case of adding - -jvmmemmax=512M for all test runs in https://s

Re: [RFS] jalview

2021-02-07 Thread James Procter (Staff)
>> a case of adding - >> -jvmmemmax=512M Thanks for your comments, I was also going to use -jvmmemmax in the tests. Yet, do you think it will be okay if someone with an i386 computer tries to launch Jalview (I have in mind the main Jalview application, not my tests)? Jalview will work, but I do t

Re: "Education Tab" - extended the Spreadsheet as a bit of an experiment

2020-11-02 Thread James Procter (Staff)
Thanks Steffen. I'll ty and pass this one around the network. Jim From: Steffen Möller Sent: 02 November 2020 15:51 To: Debian Med Project List Subject: "Education Tab" - extended the Spreadsheet as a bit of an experiment Hello, I made a first entry on a new t

Re: Could someone please clarify release status of MUMmer? (Re: Additional info: can not see update note: MUMmer)

2020-04-10 Thread James Procter
Thanks for finding the mummer4 package, Ben. On 10/04/2020 12:44, Ben Tris wrote: I don't understand that search string, can't make up what exactly was searched on. For the record, that link was to papers citing Kurtz 2004 - in scholar's usual unreadable api style. The https://mummer4.github.

Re: Could someone please clarify release status of MUMmer? (Re: Additional info: can not see update note: MUMmer)

2020-04-10 Thread James Procter
Hi All On 10/04/2020 11:31, Andreas Tille wrote: I can not comment on Ben's research. Is there any bioinformatician who could clarify what version of MUMmer should be sensibly packaged? Maybe: as a general guide you should at least provide an equivalent of the most recent bioconda package: h