Java help for bbmap needed

2023-10-18 Thread Andreas Tille
Hi Pierre (or whoever wants to take this task), I tried to upgrade bbmap but failed[1]. I stumbled upon the line: jh_build: error: find current -name '*.java' -and -type f -print0 | xargs -s 512000 -0 /usr/lib/jvm/default-java/bin/javac -g -cp /usr/share/java/mpi.jar:debian/_jh_build.bbmap -d

General remarks for writing autopkgtests

2023-10-18 Thread Andreas Tille
Hi, to conserve some discussion happening on our matrix channel[1] I'd like to summarise some principles how we design autopkgtests: The test that was written for mrtrix3[2] fails on my side with: .../tree/debian/tests/run-unit-test: 20: ./run_tests: not found The reason is that our run-unit-