Re: Snippy autopkgtest claims that snpeff is version 0

2023-02-03 Thread Pierre Gruet
Hi Andreas, Le 03/02/2023 à 13:05, Andreas Tille a écrit : Hi Pierre, Am Fri, Feb 03, 2023 at 11:32:07AM +0100 schrieb Pierre Gruet: [16:13:15] Found snippy-vcf_to_tab - /usr/bin/snippy-vcf_to_tab [16:13:15] Found snippy-vcf_report - /usr/bin/snippy-vcf_report [16:13:15] Checking version: samt

Debian Med video conference next Sunday 2023-02-05 18:00 UTC

2023-02-03 Thread Andreas Tille
Hi, this is the call for the next video conference of the Debian Med team that are an established means to organise the tasks inside our team. We diverge from our usual rule First Friday of a month Third Sunday of a month since I'm traveling today and thus we agreed on Matrix to meet on Sun

Re: Snippy autopkgtest claims that snpeff is version 0

2023-02-03 Thread Aaron M. Ucko
Andreas Tille writes: > +Architecture: amd64 arm64 Indeed. Sorry for making this restriction necessary, and for missing the need for it earlier -- I suppose Britney doesn't check very far up the reverse dependency tree for autopkgtest regressions, just for buildability ones, and doesn't care if

Re: Snippy autopkgtest claims that snpeff is version 0

2023-02-03 Thread Andreas Tille
Hi Pierre, Am Fri, Feb 03, 2023 at 11:32:07AM +0100 schrieb Pierre Gruet: > > [16:13:15] Found snippy-vcf_to_tab - /usr/bin/snippy-vcf_to_tab > > [16:13:15] Found snippy-vcf_report - /usr/bin/snippy-vcf_report > > [16:13:15] Checking version: samtools --version is >= 1.7 - ok, have 1.16 > > [16:13

Re: Snippy autopkgtest claims that snpeff is version 0

2023-02-03 Thread Pierre Gruet
Hi Andreas, Le 03/02/2023 à 11:17, Andreas Tille a écrit : Hi, I realised that snippy autopkgtest is failing for i386 and s390x[1] The log for i386[2] says: Get:310 http://deb.debian.org/debian testing/main i386 libsnpeff-java all 5.1+d+dfsg-3 [2,150 kB] ... [16:13:15] Found snpEff - /usr/bi

Snippy autopkgtest claims that snpeff is version 0

2023-02-03 Thread Andreas Tille
Hi, I realised that snippy autopkgtest is failing for i386 and s390x[1] The log for i386[2] says: Get:310 http://deb.debian.org/debian testing/main i386 libsnpeff-java all 5.1+d+dfsg-3 [2,150 kB] ... [16:13:15] Found snpEff - /usr/bin/snpEff ... [16:13:15] Found snippy-vcf_to_tab - /usr/bin/sni