Thanks a lot for enabling igv in main [Was: igv_2.6.3+dfsg2-1_amd64.changes ACCEPTED into unstable, unstable]

2021-11-08 Thread Andreas Tille
Hi Pierre, thanks a lot for all your work on this. I intended to do a source-only upload and when doing so at least fixing the watch file (I remember we need to stick for the current version for the moment ;-) ). Unfortunately I was running in a build failure in my pbuilder chroot 432 tests co

Re: Bug#984243: Help: mothur: ftbfs with GCC-11

2021-11-08 Thread Hamid Nassiby
Hi all, The problem can be fixed following these steps: 1. Revert the commit ff8928540e0d720b8a08ee4227c1bbadc2c1e733 (now, that is the last commit). 2. Apply this patch: >--- a/Makefile >+++ b/Makefile >@@ -118,8 +118,8 @@ endif ># > OBJECTS=$(patsubst %.cpp,%.o,$(wildcard $(addsuffix *.cpp,$

Re: Bug#984243: Help: mothur: ftbfs with GCC-11

2021-11-08 Thread Aaron M. Ucko
Andreas Tille writes: > which has an incomplete number of arguments that is interrupted > by '/usr/bin/ld') That looks like it might simply be an artifact of different buffering policies for standard output and standard error; I expect you'll find the remainder of the command line later on. >

Re: Please lets coordinate itk4/itk5 issues (Was: Bug#984063)

2021-11-08 Thread Steven Robbins
On Monday, November 8, 2021 1:09:43 A.M. CST Andreas Tille wrote: > Hi, > > this mail from Jose > > Am Sat, Nov 06, 2021 at 01:33:29AM +0100 schrieb Jose Luis Rivero: > > Hello! Gazebo maintainer here, affected by this RC bug. Looking into > > upstream repository there is a potential commit that

Re: Bug#984243: Help: mothur: ftbfs with GCC-11

2021-11-08 Thread Andreas Tille
Am Mon, Oct 25, 2021 at 09:16:30PM -0400 schrieb Aaron M. Ucko: > Andreas Tille writes: > > > I'm wondering why the makefile stopped working just because a new compiler > > version is used. :-( > > Along the way, you pulled in a new upstream version, whose makefile > evidently wasn't quite right

Re: libpdb-redo

2021-11-08 Thread Andrius Merkys
Hi Maarten, On 2021-11-08 13:59, Maarten L. Hekkelman wrote: > A new version of libpdb-redo is ready for upload to experimental (new > SONAME, new package libpdb-redo2). > > Could someone have a look and upload this, please? Does libpdb-redo require new libcifpp? I could give it a look. I have n

Re: Any volunteer to verify autopkgtest of spades?

2021-11-08 Thread Andreas Tille
Hi, > In case you have troubles running SPAdes, you can write to > spades.supp...@cab.spbu.ru > or report an issue on our GitHub repository github.com/ablab/spades > Please provide us with params.txt and spades.log files from the output > directory. I debugged this issue a bit and opened an iss