Hi,
I intended to update pilon to its latest upstream version but
got:
scalac -classpath /usr/share/java/htsjdk.jar -d pilon.jar
src/main/scala/org/broadinstitute/pilon/*
src/main/scala/org/broadinstitute/pilon/BamFile.scala:24: error: object jdk is
not a member of package scala
import scala.jd
Am Fri, Oct 01, 2021 at 05:46:35PM +0530 schrieb Nilesh Patra:
> On 10/1/21 5:40 PM, Steffen Möller wrote:
> > I just got
> >
> > [...]
>
> $ salsa update_repo --ci-config-path debian/salsa-ci.yml
> med-team/long-read-assembler
> $ echo $?
OK, thanks! FWIW, testing has had the same glibc version as unstable
(2.32-4) for about a week now, and AFAICT cmake from unstable is
installable in testing (though you will naturally also need to upgrade
cmake-data to match, and likewise for whichever of cmake-doc and/or
cmake-*-gui you have inst
Hi Andreas,
Thanks for the notice, actually I already started working on it few
weeks ago. I just forgot to push my changes.
I just did it however, I am currently stuck because of the current
version of CMake in testing. Patching would be really tough, so I am
waiting for CMake 3.21 to reach
On 10/1/21 5:40 PM, Steffen Möller wrote:
> Hi all,
>
> I just got
>
> [...]
$ salsa update_repo --ci-config-path debian/salsa-ci.yml
med-team/long-read-assembler
$ echo $?
0
Works okay for me. There is some local problem for you
> I
Hi Shayan,
I've updated enlighten in Git but it seems it needs
python3-prefixed>=0.3.2 which is not packaged yet.
Can you (or someone else) please have a look?
Kind regards
Andreas.
--
http://fam-tille.de
Hi all,
I just got
+ PROJECT_ID=64711
+ set +x
Error GETing https://salsa.debian.org/api/v4/user (HTTP 401):
Unauthorized {"error":"invalid_token","error_description":"Toke... at
/usr/share/perl5/Devscripts/Salsa/update_repo.pm line 114.
W: Could not initiate CI for long-read-assembler, please i
Hi Andrius,
Op 01-10-2021 om 07:32 schreef Andrius Merkys:
I think that not shipping components.cif in
a binary package and downloading it in postinst is a viable solution.
But I would rely on the choice the user makes during the package
configuration (as is done now for mmcif_pdbx_v50.dic). A d
Hi,
this is the call for the next video conference of the Debian Med team
that are an established means to organise the tasks inside our team.
We do these conferences twice per month on every
2th and 17th
of a month. Usually it takes us only 15-20min depending what we are
talking about and
Hi Flavien,
sight watch file needed to be fixed which I did and I realised there is
a new upstream version. Please update the patches (if needed) and ping
here once the package is ready for uploading.
Kind regards and thanks for caring for this package
Andreas.
--
http://fam-tille.de
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