Bug#361719: [libnjb-users] RFA: libnjb - Creative Labs Nomad Jukebox library

2006-04-10 Thread Shaun Jackman
On 4/10/06, John Bovey <[EMAIL PROTECTED]> wrote: > Hi Shaun, > > I am a user of of Debian libnjb package. I'm not a Debian developer but I'd > be willing to learn if you don't hear from anyone with more experience. I do > have a reasonable amount of experience with software development: the xvt

Bug#361719: [libnjb-users] RFA: libnjb - Creative Labs Nomad Jukebox library

2006-04-10 Thread Shaun Jackman
There are two tasks in adopting libnjb, and they can be pursued independently of one-another. One is to re-package libnjb, listing yourself as the new maintainer. The second is to apply to become a Debian developer. The "new maintainer" process is not difficult, but the queue can be long, so I sugg

Bug#316771: ITA: gnomad2

2006-04-10 Thread Shaun Jackman
On 4/10/06, Manuel García <[EMAIL PROTECTED]> wrote: > > Hello Manuel, > > > > I believe I fixed that warning just this weekend. Download gnomad2 > > 2.8.3-1 from unstable. > > > > Cheers, > > Shaun > > Sorry but i forgot something, could you plis tell me what do you do? I'm wrong Manuel. I was th

Bug#316772: RFA: Everything must go!

2006-04-10 Thread Shaun Jackman
On 4/9/06, Jaldhar H. Vyas <[EMAIL PROTECTED]> wrote: > > * Creative Labs Nomad Jukebox > > libnjb - Creative Labs Nomad Jukebox library > > gnomad2 - Manage a Creative Labs Nomad Jukebox > > I have a Creative Zen touch which use these so I can take them. I would > rather work with someone to com

Bug#354358: RFH: Test swt-gtk (azureus) on ia64 and alpha

2006-04-10 Thread Shaun Jackman
> I could test on alpha, but there's no version of swt-gtk in sarge for this > architecture. > > Why is it the old versions of this package which need testing, not the > current version? Don't worry about testing the Sarge version then; that only applies to ia64. If you could test libswt-gtk-3.1=3

Bug#361865: ocaml-nox: ocamlopt sets the rpath

2006-04-10 Thread Shaun Jackman
Package: ocaml-nox Version: 3.09.1-3 Severity: normal ocamlopt sets the rpath of the binaries it builds. The documentation gives no indication of how to disable this behaviour. Cheers, Shaun

Bug#362008: freeguide does not show any program data

2006-04-11 Thread Shaun Jackman
tag 362008 confirmed thanks I can confirm this bug exists. Although, I'm not sure what's causing it. freeguide 0.10.1-1 worked for me before. Did it ever work for you? Cheers, Shaun On 4/11/06, Uwe Storbeck <[EMAIL PROTECTED]> wrote: > Package: freeguide > Version: 0.10.1-1 > Severity: important

Bug#362008: freeguide does not show any program data

2006-04-12 Thread Shaun Jackman
On 4/12/06, Andy Balaam <[EMAIL PROTECTED]> wrote: > Sometimes in 0.10.1/2 your grabber information gets lost. It might be > worth Looking under Options, Advanced, Grabbers and making sure "XMLTV" > is checked, and then looking under XMLTV to see whether you have any > grabbers defined. If not, r

Bug#285719: [Freeguide-tv-devel] FreeGuide: Debian bug clean-up

2006-04-13 Thread Shaun Jackman
On 4/7/06, Andy Balaam <[EMAIL PROTECTED]> wrote: > Hi Shaun, > > #285719: freeguide: favourites with time entries do not work > > I have never seen this. It may be to do with the boundary when one day > changes into the next - the words "before" and "after" are interpreted > on the assumption tha

Bug#361692: libswt3.1-gtk-jni: Conflicts with libswt-gnome-gtk-3.1-jni

2006-04-14 Thread Shaun Jackman
On 4/14/06, Stephan Michels <[EMAIL PROTECTED]> wrote: > To have the same swt lib into two different packages was not our intention. > It would be good to have one swt lib in the archive, then such things > won't occur. > Is it possible to merge your swt package with our swt package? > Can we resol

Bug#361696: libswt3.1-gtk-jni: Coarse dependencies

2006-04-14 Thread Shaun Jackman
On 4/14/06, Stephan Michels <[EMAIL PROTECTED]> wrote: > 2006/4/9, Shaun Jackman <[EMAIL PROTECTED]>: > > Please put the Gnome and Mozilla shared libraries into their own > > binary packages to reduce the coarseness of libswt3.1-gtk-jni's > > dependencie

Bug#350399: Azureus finally no longer needs non-free java. It works with gij.

2006-04-14 Thread Shaun Jackman
On 4/14/06, Rogério Brito <[EMAIL PROTECTED]> wrote: > Hi, Philipp, Shaun and others that may be interested. > > On Jan 30 2006, Shaun Jackman wrote: > > Great news, Philipp! Thanks for the note. As soon as I have some time > > for Debian, I'll update the pa

Bug#350399: Azureus finally no longer needs non-free java. It works with gij.

2006-04-15 Thread Shaun Jackman
On 4/15/06, Philipp Klaus Krause <[EMAIL PROTECTED]> wrote: > Rogério Brito wrote: > > Indeed, I think that I spoke too soon: I had Azureus 2.4.0.2 up, but the > > connections to other peers were always dying (with null pointer > > exceptions). > > Which gij version did you use? I've seen that prob

Bug#362699: files in '/usr/share/doc/freeguide' all have same date.

2006-04-15 Thread Shaun Jackman
Although it's an admirable goal to have the timestamps of the documents represent their most recent change, I'm not sure it's feasible without a gross ammount of effort. The thirteen files with the time stamp of 2006-04-13 13:48 are all upstream documentation. The time stamps are munged by any numb

Bug#350399: Azureus finally no longer needs non-free java. It works with gij.

2006-04-15 Thread Shaun Jackman
On 4/15/06, Philipp Klaus Krause <[EMAIL PROTECTED]> wrote: > Shaun Jackman wrote: > > I remembered Azureus working with an experimental version of GIJ 4.1, > > but now that I have gij-4.1 4.1.0-1 installed from testing/unstable, > > it doesn't seem to work. It do

Bug#362945: `tv_grab_na_icons --help' is out of date

2006-04-16 Thread Shaun Jackman
Package: xmltv-util Version: 0.5.42-4 `tv_grab_na_icons --help' is out of date. `man tv_grab_na_icons' is correct. Cheers, Shaun $ tv_grab_na_icons --help tv_grab_na_icons [--images] $ man tv_grab_na_icons ... SYNOPSIS tv_grab_na_icons [--links] [--share dir] ... Cheers, Shaun

Bug#361692: libswt3.1-gtk-java dependency on mozilla

2006-04-17 Thread Shaun Jackman
On 4/17/06, Matthias Klose <[EMAIL PROTECTED]> wrote: > > The reason for my previous bug report, is that I consider it a > > requirement that Azureus not depend on either Gnome or Mozilla. > > how can you avoid this? it depends on /usr/lib/mozilla/libgtkembedmoz.so What exactly depends on gtkembed

Bug#362699: files in '/usr/share/doc/freeguide' all have same date.

2006-04-18 Thread Shaun Jackman
On 4/17/06, A. Costa <[EMAIL PROTECTED]> wrote: > On Sat, 15 Apr 2006 11:44:37 -0600 > "Shaun Jackman" <[EMAIL PROTECTED]> wrote: > > > Although it's an admirable goal to have the timestamps of the > > documents represent their most recent change

Bug#350861: [Yaird-devel] Bug#350861: yaird: Degraded RAID 1 array fails to boot

2006-02-01 Thread Shaun Jackman
> > On 2/1/06, Jonas Smedegaard <[EMAIL PROTECTED]> wrote: > > I agree with not including the mdadm.conf in the initrd. When the > > initrd is built though, I'd check that the mdadm configuration stored > > in the root disk's /init, which is tantamount to a config file, should > > be checked agains

Bug#351941: ethereal: Ethereal 0.10.14 available

2006-02-08 Thread Shaun Jackman
Package: ethereal Severity: wishlist Ethereal 0.10.14 is available. Cheers, Shaun

Bug#344011: ethereal-dev: Two missing header files

2006-02-08 Thread Shaun Jackman
On 2/8/06, Shaun Jackman <[EMAIL PROTECTED]> wrote: > ethereal-dev is missing epan/gnuc_format_check.h and > epan/ipv6-utils.h. gnuc_format_check.h is from Ethereal 0.10.14. It > looks as though epan/proto.h was backported from 0.10.14 without > including the new header, g

Bug#344011: ethereal-dev: Two missing header files

2006-02-08 Thread Shaun Jackman
package ethereal-dev tag 344011 +patch thanks On 2/8/06, Shaun Jackman <[EMAIL PROTECTED]> wrote: ... > ethereal-dev is missing epan/gnuc_format_check.h and > epan/ipv6-utils.h. gnuc_format_check.h is from Ethereal 0.10.14. It > looks as though epan/proto.h was backported from

Bug#344011: ethereal-dev: Two missing header files

2006-02-08 Thread Shaun Jackman
severity 344011 serious thanks Package: ethereal-dev Version: 0.10.13-1.1 Severity: serious Justification: renders package unusable ethereal-dev is missing epan/gnuc_format_check.h and epan/ipv6-utils.h. gnuc_format_check.h is from Ethereal 0.10.14. It looks as though epan/proto.h was backported

Bug#352063: rpld: failed to initalize llc layer

2006-02-09 Thread Shaun Jackman
Package: rpld Version: 1.8beta1-8 Severity: wishlist On 2/8/06, Shaun Jackman <[EMAIL PROTECTED]> wrote: > When I run rpld, it spouts the following messages to syslog: > > RPLD LLC 802.2 over NIT support $Id: llc-nit.c,v 1.8 2001/11/01 > 15:30:29 root Exp $ > RPLD 802.2

Bug#352068: rpld: Specify the network interface

2006-02-09 Thread Shaun Jackman
Package: rpld Version: 1.8beta1-8 Severity: wishlist Tags: patch This patch binds rpld to the interface specified in /etc/default/rpld by passing the -i option to rpld. Cheers, Shaun diff -ur rpld-1.8beta1-/debian/init-default rpld-1.8beta1/debian/init-default --- rpld-1.8beta1-/debian/init-defa

Bug#352063: rpld: Specify the network interface

2006-02-09 Thread Shaun Jackman
On 2/9/06, Shaun Jackman <[EMAIL PROTECTED]> wrote: ... > This patch binds rpld to the interface specified in /etc/default/rpld > by passing the -i option to rpld. ... -- "$INTERFACE" must be added to the restart|force-reload case as well as the start case. This updated p

Bug#352063: rpld: failed to initalize llc layer

2006-02-09 Thread Shaun Jackman
package rpld severity 352063 important thanks On 2/9/06, Shaun Jackman <[EMAIL PROTECTED]> wrote: > Package: rpld > Version: 1.8beta1-8 > Severity: wishlist > > On 2/8/06, Shaun Jackman <[EMAIL PROTECTED]> wrote: > > When I run rpld, it spouts the following mes

Bug#352079: rpld: Behaves strangely with multiple instances running

2006-02-09 Thread Shaun Jackman
Package: rpld Version: 1.8beta1-8 Severity: normal If multiple instances of rpld are running on the same interface, the program behaves very strangely. This misbehaviour is to be expected, but it could perhaps behave a little more elegantly, perhaps by refusing to start if another instance is dete

Bug#363348: Please ship a HAL fdi file for njb-compatible players

2006-04-18 Thread Shaun Jackman
Thanks, Sebastian. I'll look at this next time I'm preparing an upload of libnjb. Aren't device permissions handled by udev? They are on my system. Why is HAL involved? Are you a Debian developer, in addition to being an Ubuntu developer? I'm looking for someone to adopt my NJB packages. Cheers,

Bug#362699: files in '/usr/share/doc/freeguide' all have same date.

2006-04-22 Thread Shaun Jackman
On 4/22/06, A. Costa <[EMAIL PROTECTED]> wrote: ... > > I'm going to reassign this bug as a wishlist item to the debhelper > > package. > > Thanks for making the call, but just as the little bug was a symptom > of a bigger systemic bug, now the bigger bug closing is perhaps a > symptom of the bigge

Bug#364338: kernel-image-2.4.27-3-k7: Failed to create initrd image.

2006-04-22 Thread Shaun Jackman
Package: kernel-image-2.4.27-3-k7 Version: 2.4.27-10sarge2 Severity: normal Unpacking kernel-image-2.4.27-3-k7 (from .../kernel-image-2.4.27-3-k7_2.4.27-10sarge2_i386.deb) ... Selecting previously deselected package kernel-image-2.4-k7. Unpacking kernel-image-2.4-k7 (from .../kernel-image-2.4-k7

Bug#361719: [libnjb-users] RFA: libnjb - Creative Labs Nomad Jukebox library

2006-04-24 Thread Shaun Jackman
Excellent progress, John! Send me a .diff.gz, .dsc, .deb, and .changes, just as soon as you have them. After looking 'em over, I'll sponsor the upload changing maintainership of the package and advocate for you. Cheers, Shaun On 4/24/06, John Bovey <[EMAIL PROTECTED]> wrote: > Shaun, > > I have s

Bug#364706: azureus: Unable to close Warning window

2006-04-25 Thread Shaun Jackman
Did this happen just once or every time you start Azureus? Cheers, Shaun On 4/25/06, Huy Duong <[EMAIL PROTECTED]> wrote: > Package: azureus > Version: 2.4.0.2-1 > Severity: normal > > I was using Azureus when it suddenly shutdown due to a > > NullPointerException (already reported to Azureus > d

Bug#364706: azureus: Unable to close Warning window

2006-04-25 Thread Shaun Jackman
Hello Huy, I tested azureus 2.4.0.2-1 with libswt-gtk-3.1-java 3.1.2-2 and sun-j2sdk1.5 1.5.0+update04, which is your exact setup, and was unable to reproduce the bug. I ran... $ azureus & $ kill -KILL %% $ azureus ... to shut down azureus uncleanly and restart azureus. I saw the "Warning" dialo

Bug#364820: Add /usr/lib/jni to the default java.library.path

2006-04-25 Thread Shaun Jackman
Package: gcj-4.0 Version: 4:4.0.3-3 Severity: important Justification: violates a *should* directive of the Debian Policy for Java The default java.library.path of applications compiled using gcj does not include /usr/lib/jni. The Debian Policy for Java [1] states that /usr/lib/jni *should* be the

Bug#364820: Add /usr/lib/jni to the default java.library.path

2006-04-25 Thread Shaun Jackman
On 4/25/06, Shaun Jackman <[EMAIL PROTECTED]> wrote: > Package: gcj-4.0 > Version: 4:4.0.3-3 > Severity: important > Justification: violates a *should* directive of the Debian Policy for Java ... > [1] http://www.debian.org/doc/packaging-manuals/java-policy/x105.html It

Bug#364706: azureus: Unable to close Warning window

2006-04-25 Thread Shaun Jackman
package azureus tag 364706 unreproducible thanks Hello Huy, On 4/25/06, Huy Duong <[EMAIL PROTECTED]> wrote: > Here's the output you requested: ... These look fine. > As for metacity, I'm using 2.14.1-1 I just tested 2.14.1-1, I don't see the bug there either. When my mouse hovers over the bu

Bug#362699: files in '/usr/share/doc/freeguide' all have same date.

2006-04-26 Thread Shaun Jackman
On 4/26/06, A. Costa <[EMAIL PROTECTED]> wrote: > On Sat, 22 Apr 2006 14:10:23 -0600 > "Shaun Jackman" <[EMAIL PROTECTED]> wrote: > > > The bug probably shouldn't be closed. I would tag it wontfix, and post > > it on debian-devel for discussion.

Bug#354358: RM: swt-gtk [ia64] -- RoM; SIGSEGV

2006-04-26 Thread Shaun Jackman
Package: ftp.debian.org swt-gtk 3.0-6 (in sarge) does not work on ia64. It dies with a SIGSEGV. Please remove the binary packages. libswt-gtk3_3.0-6_ia64.deb libswt-gtk3-jni_3.0-6_ia64.deb libswt-mozilla3-jni_3.0-6_ia64.deb Thanks, Shaun On 4/26/06, Shaun Jackman <[EMAIL PROTECTED]>

Bug#354358: RFH: Please test swt-gtk on ia64

2006-04-26 Thread Shaun Jackman
On 4/26/06, Ian Wienand <[EMAIL PROTECTED]> wrote: > On Wed, Apr 26, 2006 at 10:13:05AM -0600, Shaun Jackman wrote: > > Try... > > $ java -Djava.library.path=/usr/lib/jni:/usr/lib \ > > -classpath .:/usr/share/java/swt-gtk-3.jar:/usr/share/java/swt-pi-gtk-3.jar > &g

Bug#364706: azureus: Unable to close Warning window

2006-04-27 Thread Shaun Jackman
On 4/26/06, Huy Duong <[EMAIL PROTECTED]> wrote: > Hi Shaun, > > Here's the info from the azureus About screen: > Java 1.5.0_04 > Sun Microsystems Inc. > SWT v3139, gtk > Linux v2.6.14, i386 Same as me, for the most part. > I tried switching window manager to sawfish, but I got > the same proble

Bug#359170: RFP: tagsoup - SAX-compliant HTML parser for Java

2006-03-26 Thread Shaun Jackman
Package: wnpp Severity: wishlist Package name: tagsoup Version: 1.0rc3 Upstream Author: John Cowan <[EMAIL PROTECTED]> URL: http://mercury.ccil.org/~cowan/XML/tagsoup/ License: GPL or AFL Description: SAX-compliant HTML parser for Java This is the home page of TagSoup, a SAX-compliant parser writ

Bug#255311: vimpart: fails to embed

2006-03-26 Thread Shaun Jackman
I've also encountered this same bug with vimpart 4:3.3.2-4 and both vim-gtk 1:6.3-071+1sarge1 and 1:6.4-007+1. Is there any resolution or work-around to this bug? Thanks, Shaun

Bug#359714: 'Swarm average' in global statistics

2006-03-28 Thread Shaun Jackman
Thank you for your bug report. I have forwarded it to the Azureus team. Cheers, Shaun On 3/28/06, David Murn <[EMAIL PROTECTED]> wrote: > Package: azureus > Version: 2.3.0.6-3 > Severity: minor > > Azureus 2.3.0.6 added a 'feature' where the average swarm speed is shown ...

Bug#360990: pocketpc-cab: Does not work with WINCE 5

2006-04-05 Thread Shaun Jackman
Package: pocketpc-sdk Version: 1.0.0-2 Submitter: Rouven Schürch <[EMAIL PROTECTED]> Tags: patch Hello Shaun we have been using your script 'pocketpc-cab' for creating an installable cab for an application of ours. Recently, after having bought a newer PDA with WIN CE 5 installed, the CABs failed

Bug#360990: pocketpc-cab: Does not work with WINCE 5

2006-04-05 Thread Shaun Jackman
On 4/5/06, eehouse <[EMAIL PROTECTED]> wrote: > Cool! > > But I can't apply the patch. I get 1.0.0-2 when I do 'apt-get source' > for pocketpc-cab. Did Rouven do a dch before sending this to you? > > Thanks, > > --Eric The sense of the patch is backwards. You can use patch -R (revert patch) to a

Bug#360990: pocketpc-cab with WINCE 5

2006-04-05 Thread Shaun Jackman
Thanks for the bug report and patch, Rouven! Can you confirm that the it's the order of the files, and not the version change that fixes the bug? Oh, the sense of your patch was backwards (you swapped the arguments to diff), but I understood what you meant. Cheers, Shaun On 4/5/06, Rouven Schür

Bug#360990: pocketpc-cab with WINCE 5

2006-04-06 Thread Shaun Jackman
Great! I've fixed the order of the files. The problem, I suspect, was not the order of the files (they did appear in reverse order as the document suggested), but that the manifest.000 file did not come first, a clear bug. I'm inclined not to change the version number gratuitously, since it's work

Bug#360990: pocketpc-cab with WINCE 5

2006-04-06 Thread Shaun Jackman
I've uploaded pocketpc-cab 1.0.1-1, which closes this bug. It should hit the mirrors soon. Once it does, can you test that it works? FWIW, I also uploaded a new version of lcab (1.0b11-1). Cheers! Shaun On 4/6/06, Rouven Schürch <[EMAIL PROTECTED]> wrote: > > Great! I've fixed the order of the fi

Bug#350058: pocketpc-sdk:

2006-01-26 Thread Shaun Jackman
Package: pocketpc-sdk Version: 1.0.0-2 Severity: serious The functions added in pocketpc-sdk 1.0.0-2 in response to bug #341059 do not exist on the Pocket PC. These functions were DialogBoxParamW, lstrcatW, lstrcpyW, GetCurrentThreadId, SetEvent, ResetEvent, and GetTextExtentPoint32W. Cheers, Sha

Bug#350058: Got it! (was Re: More on Debian PPC dev packages)

2006-01-26 Thread Shaun Jackman
On 1/26/06, Eric House <[EMAIL PROTECTED]> wrote: > I finally had an equivalently good idea. My main dev machine is > dual-boot, but hasn't been booted into W2000 in two or three years. > I just remembered that it still has an old evc3 dev system on it and > mounted the msdos partition to look at t

Bug#316770: acknowledged by developer (Bug#316770: fixed in robotour 3.2.1-1)

2006-01-27 Thread Shaun Jackman
Thanks for adopting robotour! I think it's a great introduction to programming -- and a fun game to boot! Cheers, Shaun On 1/27/06, Debian Bug Tracking System <[EMAIL PROTECTED]> wrote: ... > -BEGIN PGP SIGNED MESSAGE- > Hash: SHA1 > > Format: 1.7 > Date: Mon, 23 Jan 2006 22:55:09 +0800 >

Bug#350399: Azureus finally no longer needs non-free java. It works with gij.

2006-01-30 Thread Shaun Jackman
Great news, Philipp! Thanks for the note. As soon as I have some time for Debian, I'll update the package and push Azureus into main. gij-4.1 will have to move out of experimental and into unstable before the same can happen for Azureus though. Cheers, Shaun On 1/29/06, Philipp Klaus Krause <[EMA

Bug#350861: yaird: Degraded RAID 1 array fails to boot

2006-01-31 Thread Shaun Jackman
Package: yaird Version: 0.0.11-12 Severity: important If yaird is run while the root partition, a RAID 1 array, is in a degraded state, the system will not boot if the array is ever restored to a complete state. I installed a new kernel (linux-image-2.6.15-1-k7). I did not notice at the time that

Bug#350861: [Yaird-devel] Bug#350861: yaird: Degraded RAID 1 array fails to boot

2006-02-01 Thread Shaun Jackman
On 2/1/06, Jonas Smedegaard <[EMAIL PROTECTED]> wrote: > I believe including broken disks will then fail to boot the degraded > system (if not including --run). See bug#350710. > > Upstream dislikes including config files with the initrd. As I > understand it for the reason that the initrd should t

Bug#350399: Azureus finally no longer needs non-free java. It works with gij.

2006-03-14 Thread Shaun Jackman
GCJ 4.1 has some troubles (internal errors) compiling Azureus 2.4.0.0. I've sent a note to [EMAIL PROTECTED] If I can resolve this, I'll upload a package to experimental. Cheers, Shaun On 3/14/06, robin putters <[EMAIL PROTECTED]> wrote: > How about uploading an Azureus 'pure' debian package to e

Bug#354291: freeguide doesn't start with sun-j2sdk1.5_1.5.0+update06_i386.deb created by java-package

2006-03-17 Thread Shaun Jackman
On 3/17/06, Erwin Rennert <[EMAIL PROTECTED]> wrote: > Thank you; your advise was very helpful (and after 5 years using debian I > finally looked into the whole alternatives business ...). I should have > asked on a list instead of filing a bug. > > Thanks, > Erwin I don't mind your filing a bu

Bug#585457: ITP: igv -- Integrative Genomics Viewer

2010-06-10 Thread Shaun Jackman
Package: wnpp Severity: wishlist Package name: igv Version: 1.4.2 Upstream Author: igv-h...@broadinstitute.org URL: http://www.broadinstitute.org/igv License: LGPL Description: Integrative Genomics Viewer The Integrative Genomics Viewer (IGV) is a high-performance visualization tool for interacti

Bug#585457: IGV dependencies

2010-06-10 Thread Shaun Jackman
IGV has a lot of dependencies, and the list follows. Many of these dependencies are already in Debian; many others are not. Where the dependency is satisfied, I've given the Debian package name. Where it's not satisfied, I've given the upstream URL. Cheers, Shaun colt.jarhttp://acs.lbl.go

Bug#585457: IGV dependencies

2010-06-14 Thread Shaun Jackman
Hi Andreas, On 11 June 2010 00:41, Andreas Tille wrote: > Hi Shaun, > > On Thu, Jun 10, 2010 at 11:55:54AM -0700, Shaun Jackman wrote: >> IGV has a lot of dependencies, and the list follows. Many of these >> dependencies are already in Debian; many others are not. Where

Bug#586015: ITP: picard-tools -- manipulate SAM and BAM files

2010-06-15 Thread Shaun Jackman
Package: wnpp Severity: wishlist Package name: picard-tools Version: 1.22 Upstream Author: URL: http://picard.sourceforge.net/ License: MIT Description: manipulate SAM and BAM files This Java library implements an API to manipulate SAM and BAM files. SAM (Sequence Alignment/Map) format is a gener

Bug#565280: jtag2usb.cc:98: error: invalid conversion from 'const char*' to 'char*' [PATCH]

2010-01-24 Thread Shaun Jackman
Hi Joerg, Attached is a patch from Nobuhiro Iwamatsu to fix a compiler error in usb_dev_handle. Cheers, Shaun -- Forwarded message -- From: Nobuhiro Iwamatsu Date: 2010/1/22 Subject: Bug#565280: FTBFS: jtag2usb.cc:98: error: invalid conversion from 'const char*' to 'char*' To:

Bug#616002: bzip2 does not work with nohup

2011-03-01 Thread Shaun Jackman
Package: bzip2 Version: 1.0.5-6 When running bzip2 inside nohup, bzip2 exits when the terminal closes. Here are the steps to reproduce the issue: 1. open a terminal 2. nohup bzip2 foo & 3. close the terminal 4. open a terminal 5. cat nohup.out bzip2: Control-C or similar caught, quitting. bzip2:

Bug#619201: New upstream release available

2011-03-21 Thread Shaun Jackman
Package: picard-tools Priority: wishlist Picard 1.41 is available. Cheers, Shaun -- To UNSUBSCRIBE, email to debian-bugs-dist-requ...@lists.debian.org with a subject of "unsubscribe". Trouble? Contact listmas...@lists.debian.org

Bug#591952: RM: colt -- RoM, no rdepends

2010-08-06 Thread Shaun Jackman
again, they won't repackage it from scratch? Cheers, Shaun On 29 July 2010 01:20, Charles Plessy wrote: > Le Wed, Jul 28, 2010 at 11:31:51PM +0000, Shaun Jackman a écrit : > >> +  * Remove libcolt-java from the dependencies. > > Hi Shaun, > > if you have sometimes f

Bug#580013: uuid-dev: Should be named libuuid-dev

2010-05-02 Thread Shaun Jackman
Package: uuid-dev The package uuid-dev contains library and header files, and as such should be named libuuid-dev. Cheers, Shaun -- To UNSUBSCRIBE, email to debian-bugs-dist-requ...@lists.debian.org with a subject of "unsubscribe". Trouble? Contact listmas...@lists.debian.org

Bug#580277: ITP: gmap -- Align mRNA and EST sequences to a genome

2010-05-04 Thread Shaun Jackman
Package: wnpp Severity: wishlist Owner: Debian Med Packaging Team Package name: gmap Version: 20100309 Upstream Author: Thomas Wu URL: http://research-pub.gene.com/gmap/ License: other (DFSG) Description: Align mRNA and EST sequences to a genome GMAP is composed of two programs: GMAP: Genomic

Bug#580277: GMAP -- Align mRNA and EST sequences to a genome

2010-05-10 Thread Shaun Jackman
Hi Charles, On 4 May 2010 21:01, Charles Plessy wrote: > Le Tue, May 04, 2010 at 06:30:26PM -0700, Shaun Jackman a écrit : >> >> I've packaged GMAP: >> Align mRNA and EST sequences to a genome >>  GMAP: Genomic Mapping and Alignment Program >>  GSNAP: G

Bug#515215: sparsehash: Rename package to libsparsehash-dev

2009-02-14 Thread Shaun Jackman
Package: sparsehash Since this package is a library and contains header files, it would be better named libsparsehash-dev. Cheers, Shaun -- To UNSUBSCRIBE, email to debian-bugs-dist-requ...@lists.debian.org with a subject of "unsubscribe". Trouble? Contact listmas...@lists.debian.org

Bug#519874: RM: pocketpc-binutils

2009-03-15 Thread Shaun Jackman
Package: ftp.debian.org Please remove the source package pocketpc-binutils. I've also requested the removal of its only reverse dependency pocketpc-gcc. These toolchains are based on an obsolete version of GCC. Thanks, Shaun -- To UNSUBSCRIBE, email to debian-bugs-dist-requ...@lists.debian.or

Bug#519877: RM: pocketpc-gcc

2009-03-15 Thread Shaun Jackman
Package: ftp.debian.org Please remove the source package pocketpc-gcc.This toolchain is based on an obsolete version of GCC. It has no reverse dependencies. Thanks, Shaun -- To UNSUBSCRIBE, email to debian-bugs-dist-requ...@lists.debian.org with a subject of "unsubscribe". Trouble? Contact li

Bug#519875: RM: pocketpc-gas

2009-03-15 Thread Shaun Jackman
Package: ftp.debian.org Please remove the source package pocketpc-gas from the archive. This toolchain is based on an obsolete version of GCC. I've also requested the removal of its reverse dependencies, pocketpc-binutils and pocketpc-gcc. Thanks, Shaun -- To UNSUBSCRIBE, email to debian-bugs

Bug#426305: Bug#426304: closed by César Gómez Martín (Bug#426304: fixed in lcab 1.0b12-3)

2009-03-15 Thread Shaun Jackman
Hi César, Would you care to adopt pocketpc-cab? Cheers, Shaun 2008/1/27 César Gómez Martín : > Hello, I don't mind to adopt pocketpc-cab but I will not be able to > test it in a Pocket PC because I don't have one... > > Best regards, > César. > > On Jan 27, 2008

Bug#519874: RM: pocketpc-binutils

2009-03-16 Thread Shaun Jackman
2009/3/16 Frank Lichtenheld : > On Sun, Mar 15, 2009 at 01:35:55PM -0700, Shaun Jackman wrote: >> Please remove the source package pocketpc-binutils. I've also >> requested the removal of its only reverse dependency pocketpc-gcc. >> These toolchains are based on

Bug#518441: wireshark-dev: Please include asn2wrs.py

2009-03-05 Thread Shaun Jackman
Package: wireshark-dev Please include the script tools/asn2wrs.py in the package wireshark-dev. Thanks, Shaun -- To UNSUBSCRIBE, email to debian-bugs-dist-requ...@lists.debian.org with a subject of "unsubscribe". Trouble? Contact listmas...@lists.debian.org

Bug#516252: eagle: FTBFS on amd64

2009-02-19 Thread Shaun Jackman
Package: eagle Version: 5.4.0-1 Severity: important Submitter: Jindrich Makovicka It would be nice to have a package for x86-64 also. It seems that it suffices to remove dh_strip from the rules file to make the amd64 version build. As the closed source binaries are stripped anyway, it should be o

Bug#516255: RFA: azureus -- BitTorrent client

2009-02-19 Thread Shaun Jackman
Package: wnpp Azureus is a BitTorrent client. The upstream package has been renamed to Vuze and now has a focus on distributing and playing multimedia content. Azureus is implemented in Java and uses SWT, the cross-platform widget toolkit for Java used primarily by the Eclipse IDE. Eclipse packa

Bug#516255: Azureus adoption

2009-02-25 Thread Shaun Jackman
Hi Adnan, Thanks for your interest in adopting Azureus/Vuze. It can be a pretty tough package to maintain. I've also learned the hard way that it is best to be a daily (or at least regular) user of a package you maintain. It can be a fair bit of work, and it can be embittering if you're not sharin

Bug#520597: openmpi: New release 1.3.1 available

2009-03-21 Thread Shaun Jackman
Package: openmpi Severity: wishlist -- To UNSUBSCRIBE, email to debian-bugs-dist-requ...@lists.debian.org with a subject of "unsubscribe". Trouble? Contact listmas...@lists.debian.org

Bug#520598: sparsehash: ext/hash_fun.h not found

2009-03-21 Thread Shaun Jackman
Package: sparsehash Severity: serious google/sparse_hash_set includes ext/hash_fun.h, which is not found: configure:6326: checking google/sparse_hash_set usability configure:6338: g++ -c -g -O2 -I/usr/lib/openmpi/include conftest.cc >&5 In file included from conftest.cc:76: /usr/include/google/s

Bug#520599: sparsehash: New release 1.4

2009-03-21 Thread Shaun Jackman
Package: sparsehash Severity: wishlist http://code.google.com/p/google-sparsehash/ http://google-sparsehash.googlecode.com/files/sparsehash-1.4.tar.gz -- To UNSUBSCRIBE, email to debian-bugs-dist-requ...@lists.debian.org with a subject of "unsubscribe". Trouble? Contact listmas...@lists.debian

Bug#520597: [Pkg-openmpi-maintainers] Bug#520597: openmpi: New release 1.3.1 available

2009-03-23 Thread Shaun Jackman
Hi Manuel, Is Open MPI 1.3.1 not binary compatible with Open MPI 1.3? Cheers, Shaun -- To UNSUBSCRIBE, email to debian-bugs-dist-requ...@lists.debian.org with a subject of "unsubscribe". Trouble? Contact listmas...@lists.debian.org

Bug#588562: ITP: colt -- libraries for High Performance Scientific and Technical Computing in Java

2010-07-09 Thread Shaun Jackman
Package: wnpp Severity: wishlist Package name: colt Version: 1.2.0 Upstream author: c...@listbox.cern.ch URL: http://acs.lbl.gov/software/colt/ License: other Description: libraries for High Performance Scientific and Technical Computing in Java Scientific and technical computing, as, for example,

Bug#521746: eagle: FTBFS bug not fixed yet re: libxrender.so.1 and amd64 [fix attached]

2009-11-09 Thread Shaun Jackman
Bug #360358 asked me to replace the ia32-libs-dev in Build-Depends with libc6-dev-i386, which is the current state: http://bugs.debian.org/360358 This page says that ia32-libs-dev only exists on ia64 (not amd64): http://packages.debian.org/sid/ia32-libs-dev Though ia32-libs is available on amd64:

Bug#521746: eagle: FTBFS bug not fixed yet re: libxrender.so.1 and amd64 [fix attached]

2009-11-10 Thread Shaun Jackman
It sounds like the solution is to move ia32-libs to Build-Depends then. I'll do that. I'll also e-mail the maintainer of ia32-libs and see whether he agrees. Thanks for the bug report and solution, Scott. Cheers, Shaun -- To UNSUBSCRIBE, email to debian-bugs-dist-requ...@lists.debian.org with

Bug#546237: eagle: Eagle exits with segmentation fault

2009-10-18 Thread Shaun Jackman
Hi Johan, Here's the workaround: cp /usr/lib/eagle/bin/eagle ~/.eagle/bin/ Then run eagle normally. It shouldn't crash any longer. I'm working on a fix for the Debian package. Cheers, Shaun -- To UNSUBSCRIBE, email to debian-bugs-dist-requ...@lists.debian.org with a subject of "unsubscribe".

Bug#546237: eagle: Eagle exits with segmentation fault

2009-10-19 Thread Shaun Jackman
Great! Glad to hear it. Cheers, Shaun 2009/10/19 Johan Folkesson : > Thanks! It works perfect! > > Cheers > Johan > > Shaun Jackman wrote: >> >> Hi Johan, >> >> Here's the workaround: >> cp /usr/lib/eagle/bin/eagle ~/.eagle/bin/ >> >

Bug#631534: ITP: ABySS -- de novo, parallel, short-read assembler

2011-06-24 Thread Shaun Jackman
Package: wnpp Severity: wishlist Package name: abyss Version: 1.2.7 Upstream Author: sjack...@bcgsc.ca URL: http://www.bcgsc.ca/platform/bioinfo/software/abyss License: free for academic use Description: a de novo, parallel, paired-end sequence assembler ABySS is a de novo, parallel, paired-end s

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