Hi all,
The problem can be fixed following these steps:
1. Revert the commit ff8928540e0d720b8a08ee4227c1bbadc2c1e733 (now,
that is the last commit).
2. Apply this patch:
>--- a/Makefile
>+++ b/Makefile
>@@ -118,8 +118,8 @@ endif
>#
> OBJECTS=$(patsubst %.cpp,%.o,$(wildcard $(addsuffix *.cpp,$
Andreas Tille writes:
> which has an incomplete number of arguments that is interrupted
> by '/usr/bin/ld')
That looks like it might simply be an artifact of different buffering
policies for standard output and standard error; I expect you'll find
the remainder of the command line later on.
>
Am Mon, Oct 25, 2021 at 09:16:30PM -0400 schrieb Aaron M. Ucko:
> Andreas Tille writes:
>
> > I'm wondering why the makefile stopped working just because a new compiler
> > version is used. :-(
>
> Along the way, you pulled in a new upstream version, whose makefile
> evidently wasn't quite right
Andreas Tille writes:
> I'm wondering why the makefile stopped working just because a new compiler
> version is used. :-(
Along the way, you pulled in a new upstream version, whose makefile
evidently wasn't quite right.
--
Aaron M. Ucko, KB1CJC (amu at alum.mit.edu, ucko at debian.org)
http://
Am Fri, Oct 22, 2021 at 07:46:35AM -0400 schrieb Aaron M. Ucko:
> > # Get the list of all .cpp files, rename to .o files
> > #
> > OBJECTS=$(patsubst %.cpp,%.o,$(wildcard $(addsuffix *.cpp,$(subdirs
> > OBJECTS+=$(patsubst %.c,%.o,$(wildcard $(addsuffix *.c,$(subdirs
> > OBJECTS
Andreas Tille writes:
> OK, I've implemented this in my last commit.
Great, thanks!
> Isn't
>
> # Get the list of all .cpp files, rename to .o files
> #
> OBJECTS=$(patsubst %.cpp,%.o,$(wildcard $(addsuffix *.cpp,$(subdirs
> OBJECTS+=$(patsubst %.c,%.o,$(wildcard $(addsuffix *.c,$(s
Hi Aaron,
Am Thu, Oct 21, 2021 at 04:21:26PM -0400 schrieb Aaron M. Ucko:
>
> No, because std::byte supports far too few operations [1]. Instead, I'd
> suggest encouraging upstream to rename their type, and meanwhile locally
> patching source/uchime_src/makefile to add -std=c++14 to CXXFLAGS,
>
Hi Andreas,
Andreas Tille, on 2021-10-21:
> In file included from addtargets2.cpp:3:
> myutils.h:176:1: error: reference to 'byte' is ambiguous
Since C++ 2017, the std::byte type is defined:
> 176 | byte *ReadAllStdioFile(FILE *f, off_t &FileSize);
> | ^~~~
> In file included from /usr/i
Steffen Möller writes:
> My C++ skills are a bit rosty but would removing the typedef for byte
> solve the problem?
No, because std::byte supports far too few operations [1]. Instead, I'd
suggest encouraging upstream to rename their type, and meanwhile locally
patching source/uchime_src/makefil
On 21.10.21 20:21, Étienne Mollier wrote:
Hi Andreas,
Andreas Tille, on 2021-10-21:
In file included from addtargets2.cpp:3:
myutils.h:176:1: error: reference to 'byte' is ambiguous
Since C++ 2017, the std::byte type is defined:
176 | byte *ReadAllStdioFile(FILE *f, off_t &FileSize);
Control: tags -1 help
Hi,
I've solved one gcc-11 issue that was mentioned in this bug report but
now there are other gcc-11 issues that go beyond my C++ knowledge:
...
g++ -g -O2 -ffile-prefix-map=/build/mothur-1.46.1=. -fstack-protector-strong
-Wformat -Werror=format-security -O3 -std=c++11 -p
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