Bug#907624: What ffindex do we want to package

2019-01-04 Thread Steffen Möller
Heya, I have replied, at least I had typed it :o/ So, yes, I had chosen that version of ffsort_index to get hhsuite to compile. I have no idea if there are other reverse dependencies on ffindex, my priority is on hhsuite. Cheers, Steffen On 04.01.19 18:17, Michael Crusoe wrote: I think 0.9.

Bug#907624: What ffindex do we want to package

2019-01-04 Thread Andreas Tille
On Fri, Jan 04, 2019 at 07:17:24PM +0200, Michael Crusoe wrote: > I think 0.9.9.7+sog+git20160415.14274c9-1 is the source of the recent FTBFS > of hhsuite: https://bugs.debian.org/917495 as our packaged version is > missing the "ffsort_index" function. > > The hh-suite github repo contains a submo

Bug#907624: What ffindex do we want to package

2019-01-04 Thread Michael Crusoe
I think 0.9.9.7+sog+git20160415.14274c9-1 is the source of the recent FTBFS of hhsuite: https://bugs.debian.org/917495 as our packaged version is missing the "ffsort_index" function. The hh-suite github repo contains a submodule pointing at their fork of ffindex at ~ 2017-06-01: https://github.com

Bug#907624: What ffindex do we want to package

2018-12-20 Thread Andreas Tille
Ping? Steffen, if you did not had a specific reason I assume it was by mistake and will replace the Segfaulting code by the original one. If I do not hear from you I assume you will agree. Kind regards, Andreas. On Wed, Dec 19, 2018 at 09:53:38AM +0100, Andreas Tille wrote: > Hi, > > after readin

Bug#907624: What ffindex do we want to package

2018-12-19 Thread Steffen Möller
Hi Andreas, the reverse dependency HH-suite failed to compile with the ffindex version Debian shipped. I have no feelings about it. It should just work :)  The HH-suite is about structure prediction from sequence homology, which I found we should continue to offer in our distribution https:

Bug#907624: What ffindex do we want to package

2018-12-19 Thread Andreas Tille
Hi, after reading https://github.com/soedinglab/ffindex_soedinglab/issues/4 I came to the conclusion that we somehow picked the wrong fork of ffindex. For me it seems very probable that if we pick the old codebase bug #907624 which was introduced when choosing this will vanish if we revert to the