Here is an observation.
I set
DYLD_FALLBACK_LIBRARY_PATH=/path/to/spack/view/lib
and run as
./step-40
then it runs fine.
But if I use “make run”, then it cannot find libumfpack !!!
Best
praveen
> On 02-Oct-2020, at 6:56 PM, 'Alexander Greiner' via deal.II User Group
> wrote:
>
> Hi Jea
Hi Jean-Paul,
thank you, thank you, thank you! I finally got it working!
You're script worked with a few adaptions because I'm not using spack
views. So I had to copy and paste quite many libraries, set the paths
correctly, and then run it in several library directories of different
packages w
Hi Alexander,I am, unfortunately, marginally acquainted with the problem that you’re facing. I’m not 100% sure, but I believe that this is an upstream problem that has to do with how these packages are configured for Apple systems. I too noticed that within a couple of update cycles SuiteSparse, fo
I notice that you are using cmake from /opt/local/bin, but spack would have
installed its own cmake. Could you try using cmake from spack to compile and
then run the example ?
best
praveen
> On 29-Sep-2020, at 7:35 PM, 'Alexander Greiner' via deal.II User Group
> wrote:
>
> Hi Luca,
>
> I ra
Dear Alex,
what happens after loading dealii with `spack load dealii`, if you try to
build (from scratch) `step-40`?
Can you send us the output of cmake and make?
Luca.
On Mon, Sep 28, 2020 at 4:46 PM 'Alexander Greiner' via deal.II User Group <
dealii@googlegroups.com> wrote:
> Hi Luca,
>
>
Hi Luca,
I installed environment-modules and currently have the following lines in
my .bash_profile:
### dealii 9.2 ###
SPACK_ROOT=/Users/alexandergreiner/spack
export PATH=$SPACK_ROOT/bin:$PATH
MODULES_HOME=$(spack location -i environment-modules)
source ${MODULES_HOME}/init/zsh
. $SPACK_ROOT/s
My suggestion is to install also environment-modules, and then use
spack load dealii
This will popolate DYLD_LIBRARY_PATH with the correct values and allows your
cmake to find all libraries.
Unfortunately, recent updates to spack have made its functionality a bit clumsy
in Mac OS...
L.
> On
Hi, thanks for your suggestions.
Yes, Trilinos is installed by spack and
ls `spack location -i trilinos`/lib/libmuelu*
shows me the correct paths to the libmuelu libraries.
I also enabled Full Disk Access for Terminal.app and restarted the App as
described.
Still, the libraries are not linked
No, you dont have to recompile deal.II for what I am suggesting.
I suppose that lib is installed by spack, have you checked
ls `spack location -i trilinos`/lib/libmuelu*
Not sure if this will help, but
Have you enabled Full Disk Access for Terminal.app
If not, can you enable it and try. See t
Hi Praveen,
"Stupid" question beforehand: Do I have to reinstall deal.II? If yes, you
can skip the remainder. If no, I did the following:
I added that line to my ./bash_profile opened a new terminal window and
executed
source ./bash_profile
spack load dealii
cd spack/opt/.../deal.II/examples/s
I am not sure my solution will work in your case.
I use spack view to install symlinks into /opt/spack
Then I compile deal.II myself using dependencies installed in /opt/spack
Setting DYLD path to /opt/spack/lib then works for me, otherwise I too get
those library not found errors when running
Try adding path to you spack lib, like this
export DYLD_FALLBACK_LIBRARY_PATH=/opt/spack/lib
I add this to my $HOME/.profile file.
Best
praveen
> On 28-Sep-2020, at 2:21 PM, 'Alexander Greiner' via deal.II User Group
> wrote:
>
> Hi Wolfgang,
>
> at least I could not find a log file, but yo
Hi,
I'm new here (and also relatively new to deal.II). I'm trying to install
dealii@9.2.0 from spack, running into errors. These errors are not directly
linked to deal.II and therefore I'm not sure if this is the right place to
post my problem. Unfortunately, clang@12.0.0 and Xcode12.0 seem to
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