On 10/19/22 08:45, Simon Wiesheier wrote:
What I want to do boils down to the following:
Given the reference co-ordinates of a point 'p', along with the cell on
which 'p' lives,
give me the value and gradient of a finite element function evaluated at
'p'.
My idea was to create a quadrature o
Dear Simon,
You seem to be looking for FEPointEvaluation. That class is shown in
step-19 and provides, for simple FiniteElement types, a much faster way to
evaluate solutions at arbitrary points within a cell. Do you want to give
it a try? The issue you are facing is that FEValues that you are usi
Hello everyone!
This is deal.II newsletter #230.
It automatically reports recently merged features and discussions about the
deal.II finite element library.
## Below you find a list of recently proposed or merged features:
#14362: Execute explicit instantiations of compute_intersection_of_cell
" It's an environment variable. "
I did
$DEAL_II_NUM_THREADS
and the variable is not set.
But if it were set to one, why would this explain the gap between cpu and
wall time?
" My point is the constructor should not be called millions of times. You
are not going to be able to get that function 10
Simon,
Le mer. 19 oct. 2022 à 09:33, Simon Wiesheier a
écrit :
> Thank you for your answer!
>
> " Did you set DEAL_II_NUM_THREADS=1?"
>
> How can I double-check that?
> ccmake .
> only shows my the variables CMAKE_BUILD_TYPE and deal.II_DIR .
> But I do do knot if this is the right place to loo
Thank you for your answer!
" Did you set DEAL_II_NUM_THREADS=1?"
How can I double-check that?
ccmake .
only shows my the variables CMAKE_BUILD_TYPE and deal.II_DIR .
But I do do knot if this is the right place to look for.
" That could explain why CPU and Wall time are different. Finally, if I
Besides, the Trilinos direct solver applied is Amesos_Lapack(a mistake).
Changing to Klu therefore save more time.
在2022年10月19日星期三 UTC+8 20:30:53 写道：
> I run both matrix-based and matrix-free mode with release mode, both speed
> up a lot. The matrix-free CG iteration speeds up 30 times compared
Simon,
The best way to profile a code is to use a profiler. It can give a lot more
information than what simple timers can do. You say that your code is not
parallelized but by default deal.II is multithreaded . Did you set
DEAL_II_NUM_THREADS=1? That could explain why CPU and Wall time are
di
Dear Wayne,
For performance it certainly matters, because some components of our
codes have more low-level checks in debug mode than others, and because
the compiler optimizations do not have the same effect on all parts of
our code. Make sure to test the release mode and see if it makes more
Dear all,
I implemented two different versions to compute a stress for a given strain
and want to compare the associated computation times in release mode.
version 1: stress = fun1(strain) cpu time: 4.52 s wall time:
4.53 s
version 2: stress = fun2(strain) cpu time: 32.5s
Thanks Martin !
I never considered about Debug or optimized mode before. Cmake result says
I'm using Debug mode.
Some more information: The computaiton is done in deal.ii 9.4.0 oracle
virtualBox, with 1 mpi process in qtcreator, and CPU is intel 10600kf. I
didn't change the CMakeLists and just
Dear Wayne,
I am a bit surprised by your numbers and find them rather high, at least
with the chosen problem sizes. I would expect the matrix-free solver to
run in less than a second for 111,000 unknowns on typical computers, not
almost 10 seconds. I need to honestly say that I do not have a g
Thanks for your reply Peter,
The matrix-free run is basic same as in step-75 except I substitute coarse
grid solver. For fe_degree=6 without GMG and fe_degree in each level
decrease by 1 for pMG, the solve_system() function runtime is 24.1s. It's
decomposed to *MatrixFree MG operators construct
Hi Wayne,
your numbers make totally sense. Don't forget that you are running for high
order: degree=6! The number of non-zeroes per element-stiffness matrix is
((degree + 1)^dim)^2 and the cost of computing the element stiffness matrix
is even ((degree + 1)^dim)^3 if I am not mistaken (3 nested
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