Re: [Cloud] Intermittent hangs on tools-sgebastion-07?

2019-11-29 Thread Manuel Repol
I been experiencing a lot of problems in that bastion too. Apart from intermittent hangs and ssh timeouts some files are getting randomly corrupted while transferring them over SFTP, every time I copy them they have a different checksum. It was so problematic that I had to pack them all in a .z

[Cloud] /util/arch and /usrlbin//now missing?

2019-11-29 Thread Roy Smith
When I run qstatus on tools-sgebastion-08, I get the following errors: (env) utils $ qstatus /usr/bin/qstatus: line 299: /util/arch: No such file or directory /usr/bin/qstatus: line 300: /utilbin//now: No such file or directory Waiting jobs for user: roysmith job-ID # name

Re: [Cloud] /util/arch and /usrlbin//now missing?

2019-11-29 Thread Alex Monk
Looks like maybe the trick is to set the environment SGE_ROOT=/var/lib/gridengine Or, `qstat` instead of `qstatus`. On Fri, 29 Nov 2019 at 22:01, Roy Smith wrote: > When I run qstatus on tools-sgebastion-08, I get the following errors: > > > (env) utils $ qstatus > /usr/bin/qstatus: line 299: /u