MonetDB: default - Fix compiler "variable may be used uninitiali...

2016-04-25 Thread Robin Cijvat
Changeset: 3d370112d4b8 for MonetDB URL: http://dev.monetdb.org/hg/MonetDB?cmd=changeset;node=3d370112d4b8 Modified Files: monetdb5/optimizer/opt_reorder.c Branch: default Log Message: Fix compiler "variable may be used uninitialized" error diffs (12 lines): diff --git a/monetdb5/optimi

MonetDB: default - Fix preprocessor compilation issue

2015-11-22 Thread Robin Cijvat
Changeset: 37403127e328 for MonetDB URL: http://dev.monetdb.org/hg/MonetDB?cmd=changeset;node=37403127e328 Modified Files: sql/backends/monet5/vaults/bam/bam_wrapper.c Branch: default Log Message: Fix preprocessor compilation issue diffs (12 lines): diff --git a/sql/backends/monet5/vaul

MonetDB: profiler - Flush stdout after every JSON object

2015-11-10 Thread Robin Cijvat
Changeset: 7f1d8af451e8 for MonetDB URL: http://dev.monetdb.org/hg/MonetDB?cmd=changeset;node=7f1d8af451e8 Modified Files: clients/mapiclient/stethoscope.c Branch: profiler Log Message: Flush stdout after every JSON object diffs (18 lines): diff --git a/clients/mapiclient/stethoscope.c

MonetDB: profiler - Changes in stethoscope:

2015-11-05 Thread Robin Cijvat
Changeset: 997c7811bf34 for MonetDB URL: http://dev.monetdb.org/hg/MonetDB?cmd=changeset;node=997c7811bf34 Modified Files: clients/mapiclient/stethoscope.c Branch: profiler Log Message: Changes in stethoscope: - Always either write to stdout or to specified file - Add json flag that, when

MonetDB: profiler - Enable beautified statements

2015-11-05 Thread Robin Cijvat
Changeset: 795a98661f1b for MonetDB URL: http://dev.monetdb.org/hg/MonetDB?cmd=changeset;node=795a98661f1b Modified Files: monetdb5/mal/mal_profiler.c Branch: profiler Log Message: Enable beautified statements diffs (21 lines): diff --git a/monetdb5/mal/mal_profiler.c b/monetdb5/mal/mal

MonetDB: profiler - Change help message in stable.err

2015-11-05 Thread Robin Cijvat
Changeset: 03dbc027b047 for MonetDB URL: http://dev.monetdb.org/hg/MonetDB?cmd=changeset;node=03dbc027b047 Modified Files: clients/mapiclient/Tests/stethoscope--help.stable.err Branch: profiler Log Message: Change help message in stable.err diffs (41 lines): diff --git a/clients/mapicli

MonetDB: default - NodeJS client source code is now hosted on gi...

2015-11-02 Thread Robin Cijvat
Changeset: 938ce957c0eb for MonetDB URL: http://dev.monetdb.org/hg/MonetDB?cmd=changeset;node=938ce957c0eb Removed Files: clients/nodejs/Tests/nodetest.js clients/nodejs/monetdb/README.md clients/nodejs/monetdb/mapiclient.js clients/nodejs/monetdb/package.json Branch

MonetDB: default - Update npm version

2015-07-01 Thread Robin Cijvat
Changeset: 6b31db1e14d5 for MonetDB URL: http://dev.monetdb.org/hg/MonetDB?cmd=changeset;node=6b31db1e14d5 Modified Files: clients/nodejs/monetdb/package.json Branch: default Log Message: Update npm version diffs (11 lines): diff --git a/clients/nodejs/monetdb/package.json b/clients/no

MonetDB: default - Also support dates in prepared statement exec...

2015-07-01 Thread Robin Cijvat
Changeset: 41c633c2aefe for MonetDB URL: http://dev.monetdb.org/hg/MonetDB?cmd=changeset;node=41c633c2aefe Modified Files: clients/nodejs/monetdb/mapiclient.js Branch: default Log Message: Also support dates in prepared statement execution diffs (18 lines): diff --git a/clients/nodejs/m

MonetDB: default - Extend the prepared statement handling to sup...

2015-06-30 Thread Robin Cijvat
Changeset: 28883be78b39 for MonetDB URL: http://dev.monetdb.org/hg/MonetDB?cmd=changeset;node=28883be78b39 Modified Files: clients/nodejs/monetdb/mapiclient.js clients/nodejs/monetdb/package.json Branch: default Log Message: Extend the prepared statement handling to support json an

MonetDB: default - Properly reconstruct escaped characters \t, \...

2015-06-03 Thread Robin Cijvat
Changeset: 8df3a20c7058 for MonetDB URL: http://dev.monetdb.org/hg/MonetDB?cmd=changeset;node=8df3a20c7058 Modified Files: clients/nodejs/Tests/nodetest.js clients/nodejs/monetdb/mapiclient.js clients/nodejs/monetdb/package.json Branch: default Log Message: Properly reconst

MonetDB: bamloader - Merge with default

2015-04-29 Thread Robin Cijvat
Changeset: de97b2973b94 for MonetDB URL: http://dev.monetdb.org/hg/MonetDB?cmd=changeset;node=de97b2973b94 Added Files: clients/mapiclient/Tests/tachograph--help clients/mapiclient/Tests/tachograph--help.bat clients/mapiclient/Tests/tachograph--help.stable.err client

MonetDB: bamloader - Merge with default

2015-04-22 Thread Robin Cijvat
Changeset: c3b0b8e5956b for MonetDB URL: http://dev.monetdb.org/hg/MonetDB?cmd=changeset;node=c3b0b8e5956b Added Files: clients/R/build-for-cran.sh clients/Tests/MAL-signatures.malC clients/Tests/MAL-signatures.stable.err clients/Tests/MAL-signatures.stable.out

MonetDB: bamloader - Merge with default

2015-03-12 Thread Robin Cijvat
Changeset: 04e4a6a7dac6 for MonetDB URL: http://dev.monetdb.org/hg/MonetDB?cmd=changeset;node=04e4a6a7dac6 Modified Files: clients/nodejs/monetdb/mapiclient.js clients/nodejs/monetdb/package.json clients/odbc/driver/ODBCStmt.h clients/odbc/driver/SQLExtendedFetch.c

MonetDB: default - MonetDB/NodeJS: Update package version

2015-03-10 Thread Robin Cijvat
Changeset: ec75240aad7f for MonetDB URL: http://dev.monetdb.org/hg/MonetDB?cmd=changeset;node=ec75240aad7f Modified Files: clients/nodejs/monetdb/package.json Branch: default Log Message: MonetDB/NodeJS: Update package version diffs (11 lines): diff --git a/clients/nodejs/monetdb/packag

MonetDB: default - Add timestamp prefix to timestamp arguments i...

2015-03-10 Thread Robin Cijvat
Changeset: f84672e52d8f for MonetDB URL: http://dev.monetdb.org/hg/MonetDB?cmd=changeset;node=f84672e52d8f Modified Files: clients/nodejs/monetdb/mapiclient.js Branch: default Log Message: Add timestamp prefix to timestamp arguments in the execution of prepared statements diffs (40 line

MonetDB: bamloader - Merge with default

2015-03-10 Thread Robin Cijvat
Changeset: c66c91916d41 for MonetDB URL: http://dev.monetdb.org/hg/MonetDB?cmd=changeset;node=c66c91916d41 Added Files: clients/R/Makefile.ag clients/R/MonetDB.R/Makefile.ag clients/R/MonetDB.R/src/Makefile.ag clients/R/MonetDB.R/src/mapisplit-r.c clients/R/M

MonetDB: bamloader - Do not track pyc file

2015-03-10 Thread Robin Cijvat
Changeset: f6f83b8f23f3 for MonetDB URL: http://dev.monetdb.org/hg/MonetDB?cmd=changeset;node=f6f83b8f23f3 Removed Files: sql/backends/monet5/bam/Tests/bam.pyc Branch: bamloader Log Message: Do not track pyc file diffs (7 lines): diff --git a/sql/backends/monet5/bam/Tests/bam.pyc b/sql

MonetDB: bamloader - Merged with default

2015-02-20 Thread Robin Cijvat
Changeset: b847a55bc9f2 for MonetDB URL: http://dev.monetdb.org/hg/MonetDB?cmd=changeset;node=b847a55bc9f2 Added Files: clients/R/MonetDB.R/src/Makevars.win clients/R/MonetDB.R/src/profiler.c clients/mapiclient/eventparser.c clients/mapiclient/eventparser.h c

MonetDB: default - Updated readme and version number

2015-02-12 Thread Robin Cijvat
Changeset: 57cf0e1e0c2e for MonetDB URL: http://dev.monetdb.org/hg/MonetDB?cmd=changeset;node=57cf0e1e0c2e Modified Files: clients/nodejs/monetdb/README.md clients/nodejs/monetdb/package.json Branch: default Log Message: Updated readme and version number diffs (29 lines): diff -

MonetDB: default - Extended nodejs client with an optional loggi...

2015-02-12 Thread Robin Cijvat
Changeset: 276f3da3ae88 for MonetDB URL: http://dev.monetdb.org/hg/MonetDB?cmd=changeset;node=276f3da3ae88 Modified Files: clients/nodejs/Tests/nodetest.js clients/nodejs/monetdb/mapiclient.js Branch: default Log Message: Extended nodejs client with an optional logging callback d

MonetDB: bamloader - Replace BBPreleaseref with BBPunfix

2015-02-12 Thread Robin Cijvat
Changeset: a81783156d70 for MonetDB URL: http://dev.monetdb.org/hg/MonetDB?cmd=changeset;node=a81783156d70 Modified Files: sql/backends/monet5/bam/bam_lib.c Branch: bamloader Log Message: Replace BBPreleaseref with BBPunfix diffs (81 lines): diff --git a/sql/backends/monet5/bam/bam_lib.

MonetDB: bamloader - Fixed test

2015-02-12 Thread Robin Cijvat
Changeset: d96643f0932f for MonetDB URL: http://dev.monetdb.org/hg/MonetDB?cmd=changeset;node=d96643f0932f Modified Files: sql/backends/monet5/bam/Tests/bam_lib_mal.stable.out Branch: bamloader Log Message: Fixed test diffs (12 lines): diff --git a/sql/backends/monet5/bam/Tests/bam_lib_

MonetDB: bamloader - Merge with default

2014-11-28 Thread Robin Cijvat
Changeset: 9654ce09f3a2 for MonetDB URL: http://dev.monetdb.org/hg/MonetDB?cmd=changeset;node=9654ce09f3a2 Modified Files: sql/test/pg_regress/Tests/alter_table.stable.err sql/test/pg_regress/Tests/arrays.stable.err sql/test/pg_regress/Tests/boolean.stable.err sql/te

MonetDB: bamloader - Added some MAL tests for testing the UDFs

2014-11-28 Thread Robin Cijvat
Changeset: 1e897d944e34 for MonetDB URL: http://dev.monetdb.org/hg/MonetDB?cmd=changeset;node=1e897d944e34 Added Files: sql/backends/monet5/bam/Tests/bam_lib_mal.mal sql/backends/monet5/bam/Tests/bam_lib_mal.stable.err sql/backends/monet5/bam/Tests/bam_lib_mal.stable.out Rem

MonetDB: bamloader - Improve seq_length_bat by direct appending ...

2014-11-28 Thread Robin Cijvat
Changeset: 15361647fecc for MonetDB URL: http://dev.monetdb.org/hg/MonetDB?cmd=changeset;node=15361647fecc Modified Files: sql/backends/monet5/bam/bam_lib.c Branch: bamloader Log Message: Improve seq_length_bat by direct appending instead of usign BUNappend and make code of reverse_seq_ba

MonetDB: bamloader - Added minimal MAL test that demonstrates wh...

2014-11-28 Thread Robin Cijvat
Changeset: a589e25d2715 for MonetDB URL: http://dev.monetdb.org/hg/MonetDB?cmd=changeset;node=a589e25d2715 Added Files: sql/backends/monet5/bam/Tests/seq_char.mal Branch: bamloader Log Message: Added minimal MAL test that demonstrates where coverage test case fails: misalignment in input

MonetDB: bamloader - Use GDKnr_threads within bam loader

2014-11-27 Thread Robin Cijvat
Changeset: 72bd0543ee79 for MonetDB URL: http://dev.monetdb.org/hg/MonetDB?cmd=changeset;node=72bd0543ee79 Modified Files: sql/backends/monet5/bam/bam_loader.c Branch: bamloader Log Message: Use GDKnr_threads within bam loader diffs (21 lines): diff --git a/sql/backends/monet5/bam/bam_l

MonetDB: bamloader - Let seq_char also use the more efficient ve...

2014-11-27 Thread Robin Cijvat
Changeset: c5fa74ef8100 for MonetDB URL: http://dev.monetdb.org/hg/MonetDB?cmd=changeset;node=c5fa74ef8100 Modified Files: sql/backends/monet5/bam/bam_lib.c Branch: bamloader Log Message: Let seq_char also use the more efficient version of the CIGAR parser diffs (64 lines): diff --git a

MonetDB: bamloader - Replace sscanf with more efficient parsing ...

2014-11-27 Thread Robin Cijvat
Changeset: c38437e1b729 for MonetDB URL: http://dev.monetdb.org/hg/MonetDB?cmd=changeset;node=c38437e1b729 Modified Files: sql/backends/monet5/bam/bam_lib.c Branch: bamloader Log Message: Replace sscanf with more efficient parsing in seq_length diffs (52 lines): diff --git a/sql/backend

MonetDB: bamloader - Hard code number of threads instead of lett...

2014-11-27 Thread Robin Cijvat
Changeset: 9ad8b922c870 for MonetDB URL: http://dev.monetdb.org/hg/MonetDB?cmd=changeset;node=9ad8b922c870 Modified Files: sql/backends/monet5/bam/85_bam.sql sql/backends/monet5/bam/Tests/sql/bam_loader_files.sql sql/backends/monet5/bam/Tests/sql/bam_loader_repos.sql

MonetDB: bamloader - Merge with default

2014-11-27 Thread Robin Cijvat
Changeset: 13b37e298c46 for MonetDB URL: http://dev.monetdb.org/hg/MonetDB?cmd=changeset;node=13b37e298c46 Modified Files: sql/backends/monet5/generator/generator.c Branch: bamloader Log Message: Merge with default diffs (89 lines): diff --git a/sql/backends/monet5/generator/generator.c

MonetDB: bamloader - Keep forward and backward pointers for reve...

2014-11-26 Thread Robin Cijvat
Changeset: 86ac986f6f30 for MonetDB URL: http://dev.monetdb.org/hg/MonetDB?cmd=changeset;node=86ac986f6f30 Modified Files: sql/backends/monet5/bam/bam_lib.c Branch: bamloader Log Message: Keep forward and backward pointers for reverse_seq and reverse_qual to improve performance diffs (4

MonetDB: bamloader - Improved bam_flag udfs by using lookup tabl...

2014-11-26 Thread Robin Cijvat
Changeset: 5b5cbb2c5217 for MonetDB URL: http://dev.monetdb.org/hg/MonetDB?cmd=changeset;node=5b5cbb2c5217 Modified Files: sql/backends/monet5/bam/bam_lib.c Branch: bamloader Log Message: Improved bam_flag udfs by using lookup tables instead of serial string comparison diffs (96 lines):

MonetDB: bamloader - Always clean up on exceptions

2014-11-26 Thread Robin Cijvat
Changeset: df1858231ff4 for MonetDB URL: http://dev.monetdb.org/hg/MonetDB?cmd=changeset;node=df1858231ff4 Modified Files: sql/backends/monet5/bam/bam_lib.c Branch: bamloader Log Message: Always clean up on exceptions diffs (127 lines): diff --git a/sql/backends/monet5/bam/bam_lib.c b/

MonetDB: bamloader - Replaced linear time case-statement by cons...

2014-11-26 Thread Robin Cijvat
Changeset: 6a45c22ca31d for MonetDB URL: http://dev.monetdb.org/hg/MonetDB?cmd=changeset;node=6a45c22ca31d Modified Files: sql/backends/monet5/bam/Tests/bam_lib.stable.err sql/backends/monet5/bam/Tests/bam_lib.stable.out sql/backends/monet5/bam/bam_lib.c Branch: bamloader Lo

MonetDB: bamloader - Improved bam_flag bulk version by directly ...

2014-11-26 Thread Robin Cijvat
Changeset: afdccf6751c0 for MonetDB URL: http://dev.monetdb.org/hg/MonetDB?cmd=changeset;node=afdccf6751c0 Modified Files: sql/backends/monet5/bam/bam_lib.c Branch: bamloader Log Message: Improved bam_flag bulk version by directly writing to BAT. Also attempted this for other functions, b

MonetDB: bamloader - Simplified and improved some tests, added c...

2014-11-26 Thread Robin Cijvat
Changeset: 3f7305d007e1 for MonetDB URL: http://dev.monetdb.org/hg/MonetDB?cmd=changeset;node=3f7305d007e1 Added Files: sql/backends/monet5/bam/Tests/bam_lib.reqtests sql/backends/monet5/bam/Tests/bam_lib.sql sql/backends/monet5/bam/Tests/coverage_usecase.reqtests sq

MonetDB: bamloader - Included bulk version of seq_char in tests

2014-11-26 Thread Robin Cijvat
Changeset: 615ce04ed0c6 for MonetDB URL: http://dev.monetdb.org/hg/MonetDB?cmd=changeset;node=615ce04ed0c6 Modified Files: sql/backends/monet5/bam/Tests/bam_lib.stable.out sql/backends/monet5/bam/Tests/sql/bam_lib.sql Branch: bamloader Log Message: Included bulk version of seq_char

MonetDB: bamloader - Treat "=" character in CIGAR string as the ...

2014-11-25 Thread Robin Cijvat
Changeset: 95104df7abc8 for MonetDB URL: http://dev.monetdb.org/hg/MonetDB?cmd=changeset;node=95104df7abc8 Modified Files: sql/backends/monet5/bam/bam_lib.c Branch: bamloader Log Message: Treat "=" character in CIGAR string as the "m" character when calculating seq_char diffs (38 lines)

MonetDB: bamloader - Merge with default

2014-11-25 Thread Robin Cijvat
Changeset: 6f1a94ecdfcf for MonetDB URL: http://dev.monetdb.org/hg/MonetDB?cmd=changeset;node=6f1a94ecdfcf Added Files: sql/backends/monet5/bam/default_schema.dia sql/backends/monet5/bam/default_schema.png sql/backends/monet5/bam/metadata.dia sql/backends/monet5/bam/

MonetDB: default - Add decent graphics of database schemas that ...

2014-11-25 Thread Robin Cijvat
Changeset: 7c9cec2601fa for MonetDB URL: http://dev.monetdb.org/hg/MonetDB?cmd=changeset;node=7c9cec2601fa Added Files: sql/backends/monet5/bam/default_schema.dia sql/backends/monet5/bam/default_schema.png sql/backends/monet5/bam/metadata.dia sql/backends/monet5/bam/

MonetDB: bamloader - Revert bam_lib.c and bam.mal back to their ...

2014-11-25 Thread Robin Cijvat
Changeset: 652329ec295a for MonetDB URL: http://dev.monetdb.org/hg/MonetDB?cmd=changeset;node=652329ec295a Modified Files: sql/backends/monet5/bam/bam.mal sql/backends/monet5/bam/bam_lib.c Branch: bamloader Log Message: Revert bam_lib.c and bam.mal back to their previous bulk opera

MonetDB: bamloader - Merge with default

2014-11-25 Thread Robin Cijvat
Changeset: 85bbd04c51b0 for MonetDB URL: http://dev.monetdb.org/hg/MonetDB?cmd=changeset;node=85bbd04c51b0 Added Files: sql/test/BugTracker-2014/Tests/case-sqrt.Bug-3627.sql sql/test/BugTracker-2014/Tests/case-sqrt.Bug-3627.stable.err sql/test/BugTracker-2014/Tests/case-sqrt

MonetDB: bamloader - Added thorough testing of bam_lib and added...

2014-11-25 Thread Robin Cijvat
Changeset: 91d6d8630be1 for MonetDB URL: http://dev.monetdb.org/hg/MonetDB?cmd=changeset;node=91d6d8630be1 Added Files: sql/backends/monet5/bam/Tests/bam.pyc sql/backends/monet5/bam/Tests/bam_lib.SQL.py sql/backends/monet5/bam/Tests/bam_lib.stable.err sql/backends/mo

MonetDB: bamloader - Initialize BAT pointers to NULL, compiler d...

2014-11-21 Thread Robin Cijvat
Changeset: ecbfa7f49a2e for MonetDB URL: http://dev.monetdb.org/hg/MonetDB?cmd=changeset;node=ecbfa7f49a2e Modified Files: sql/backends/monet5/bam/bam_lib.c Branch: bamloader Log Message: Initialize BAT pointers to NULL, compiler does not like it otherwise diffs (12 lines): diff --git a

MonetDB: bamloader - Merge with default

2014-11-21 Thread Robin Cijvat
Changeset: d08a2ca961f6 for MonetDB URL: http://dev.monetdb.org/hg/MonetDB?cmd=changeset;node=d08a2ca961f6 Modified Files: .hgtags MonetDB.spec NT/installer32/MonetDB-ODBC-Installer.vdproj NT/installer32/MonetDB5-Geom-Module.vdproj NT/installer32/MonetDB5-SQL

MonetDB: bamloader - Merge with default

2014-11-20 Thread Robin Cijvat
Changeset: 5bb422b5d2e8 for MonetDB URL: http://dev.monetdb.org/hg/MonetDB?cmd=changeset;node=5bb422b5d2e8 Added Files: sql/test/BugTracker-2014/Tests/typecast_error.Bug-3622.sql Modified Files: clients/mapiclient/tomograph.c gdk/ChangeLog.Oct2014 gdk/gdk_atoms.c

MonetDB: bamloader - Merge with default

2014-11-19 Thread Robin Cijvat
Changeset: 04191ece031d for MonetDB URL: http://dev.monetdb.org/hg/MonetDB?cmd=changeset;node=04191ece031d Modified Files: monetdb5/optimizer/opt_generator.c sql/backends/monet5/generator/generator.c sql/backends/monet5/generator/generator.mal Branch: bamloader Log Message:

MonetDB: bamloader - Merge with default

2014-11-19 Thread Robin Cijvat
Changeset: ec1329475b17 for MonetDB URL: http://dev.monetdb.org/hg/MonetDB?cmd=changeset;node=ec1329475b17 Added Files: sql/backends/monet5/generator/Tests/rangejoin.sql sql/backends/monet5/generator/Tests/rangejoin.stable.err sql/backends/monet5/generator/Tests/rangejoin.st

MonetDB: bamloader - Merge with default

2014-11-16 Thread Robin Cijvat
Changeset: 1901ba646704 for MonetDB URL: http://dev.monetdb.org/hg/MonetDB?cmd=changeset;node=1901ba646704 Added Files: clients/mapilib/ChangeLog-Archive clients/nodejs/Tests/nodetest.js clients/nodejs/monetdb/README.md clients/nodejs/monetdb/mapiclient.js cl

MonetDB: bamloader - Delay opening of file handles to the point ...

2014-11-11 Thread Robin Cijvat
Changeset: 2e254b0c071f for MonetDB URL: http://dev.monetdb.org/hg/MonetDB?cmd=changeset;node=2e254b0c071f Modified Files: sql/backends/monet5/bam/bam_loader.c sql/backends/monet5/bam/bam_wrapper.c sql/backends/monet5/bam/bam_wrapper.h Branch: bamloader Log Message: Delay o

MonetDB: default - NodeJS connector: update package version

2014-11-10 Thread Robin Cijvat
Changeset: 9cc5f7d3867c for MonetDB URL: http://dev.monetdb.org/hg/MonetDB?cmd=changeset;node=9cc5f7d3867c Modified Files: clients/nodejs/monetdb/package.json Branch: default Log Message: NodeJS connector: update package version diffs (11 lines): diff --git a/clients/nodejs/monetdb/pack

MonetDB: default - Handle null in param array correctly

2014-11-10 Thread Robin Cijvat
Changeset: 7fbf1caaeabe for MonetDB URL: http://dev.monetdb.org/hg/MonetDB?cmd=changeset;node=7fbf1caaeabe Modified Files: clients/nodejs/monetdb/mapiclient.js Branch: default Log Message: Handle null in param array correctly diffs (13 lines): diff --git a/clients/nodejs/monetdb/mapicli

MonetDB: default - NodeJS connector: Fixed bug that prevented th...

2014-11-06 Thread Robin Cijvat
Changeset: 93da657eae35 for MonetDB URL: http://dev.monetdb.org/hg/MonetDB?cmd=changeset;node=93da657eae35 Modified Files: clients/nodejs/monetdb/mapiclient.js clients/nodejs/monetdb/package.json Branch: default Log Message: NodeJS connector: Fixed bug that prevented the callback f

MonetDB: default - Cleaned up argument handling

2014-11-06 Thread Robin Cijvat
Changeset: 5facdb3d0476 for MonetDB URL: http://dev.monetdb.org/hg/MonetDB?cmd=changeset;node=5facdb3d0476 Modified Files: clients/nodejs/monetdb/mapiclient.js clients/nodejs/monetdb/package.json Branch: default Log Message: Cleaned up argument handling diffs (27 lines): diff --

MonetDB: default - Version 0.1.8

2014-10-31 Thread Robin Cijvat
Changeset: 24f875d842a7 for MonetDB URL: http://dev.monetdb.org/hg/MonetDB?cmd=changeset;node=24f875d842a7 Modified Files: clients/nodejs/Tests/nodetest.js clients/nodejs/monetdb/package.json Branch: default Log Message: Version 0.1.8 diffs (21 lines): diff --git a/clients/nodej

MonetDB: default - Added a solid README in markdown format

2014-10-31 Thread Robin Cijvat
Changeset: 0c72266c729e for MonetDB URL: http://dev.monetdb.org/hg/MonetDB?cmd=changeset;node=0c72266c729e Added Files: clients/nodejs/monetdb/README.md Removed Files: clients/nodejs/monetdb/README Branch: default Log Message: Added a solid README in markdown format diffs (121 li

MonetDB: default - Merge changes to default

2014-10-31 Thread Robin Cijvat
Changeset: 01b84231395d for MonetDB URL: http://dev.monetdb.org/hg/MonetDB?cmd=changeset;node=01b84231395d Modified Files: gdk/gdk.h gdk/gdk_bat.c gdk/gdk_join.c gdk/gdk_search.h gdk/gdk_select.c gdk/gdk_setop.c monetdb5/modules/atoms/str.c

MonetDB: default - Let close accept a callback that gets called ...

2014-10-30 Thread Robin Cijvat
Changeset: e1d4ab77171c for MonetDB URL: http://dev.monetdb.org/hg/MonetDB?cmd=changeset;node=e1d4ab77171c Modified Files: clients/nodejs/monetdb/mapiclient.js Branch: default Log Message: Let close accept a callback that gets called when socket.destroy is called, and create Q based disco

MonetDB: bamloader - Merge with default

2014-10-30 Thread Robin Cijvat
Changeset: cd686acf3134 for MonetDB URL: http://dev.monetdb.org/hg/MonetDB?cmd=changeset;node=cd686acf3134 Removed Files: clients/R/MonetDB.R/src/Makevars.win clients/R/MonetDB.R/src/mapi.c Modified Files: clients/R/MonetDB.R/NEWS clients/R/MonetDB.R/R/dbi.R

MonetDB: bamloader - Merge with default

2014-10-30 Thread Robin Cijvat
Changeset: 13957da3e185 for MonetDB URL: http://dev.monetdb.org/hg/MonetDB?cmd=changeset;node=13957da3e185 Added Files: sql/test/mergetables/Tests/emptymergequery.stable.err sql/test/mergetables/Tests/emptymergequery.stable.out sql/test/mergetables/Tests/mergeloadidx.sql

MonetDB: default - Added key constraint on mergetable definition...

2014-10-21 Thread Robin Cijvat
Changeset: bf3858286beb for MonetDB URL: http://dev.monetdb.org/hg/MonetDB?cmd=changeset;node=bf3858286beb Modified Files: sql/backends/monet5/bam/Tests/sql/mergetable.sql Branch: default Log Message: Added key constraint on mergetable definition in mergetable test diffs (13 lines): dif

MonetDB: bamloader - Merge with default

2014-10-21 Thread Robin Cijvat
Changeset: a42705485166 for MonetDB URL: http://dev.monetdb.org/hg/MonetDB?cmd=changeset;node=a42705485166 Added Files: sql/backends/monet5/bam/Tests/mergetable.stable.err sql/backends/monet5/bam/Tests/mergetable.stable.out Branch: bamloader Log Message: Merge with default diffs

MonetDB: default - Newline at end of files

2014-10-21 Thread Robin Cijvat
Changeset: 37c1b2ce60e9 for MonetDB URL: http://dev.monetdb.org/hg/MonetDB?cmd=changeset;node=37c1b2ce60e9 Modified Files: sql/backends/monet5/bam/Tests/mergetable.stable.err sql/backends/monet5/bam/Tests/mergetable.stable.out Branch: default Log Message: Newline at end of files

MonetDB: default - Added stable out/err

2014-10-21 Thread Robin Cijvat
Changeset: 9ddf1b29b74e for MonetDB URL: http://dev.monetdb.org/hg/MonetDB?cmd=changeset;node=9ddf1b29b74e Added Files: sql/backends/monet5/bam/Tests/mergetable.stable.err sql/backends/monet5/bam/Tests/mergetable.stable.out Branch: default Log Message: Added stable out/err diffs

MonetDB: bamloader - Merge with default

2014-10-20 Thread Robin Cijvat
Changeset: 7588bd33711f for MonetDB URL: http://dev.monetdb.org/hg/MonetDB?cmd=changeset;node=7588bd33711f Added Files: sql/backends/monet5/bam/Tests/mergetable.SQL.py sql/backends/monet5/bam/Tests/sql/mergetable.sql Modified Files: sql/backends/monet5/bam/Tests/All

MonetDB: default - Add test case for creating a merge table over...

2014-10-20 Thread Robin Cijvat
Changeset: 6cb7f375f65d for MonetDB URL: http://dev.monetdb.org/hg/MonetDB?cmd=changeset;node=6cb7f375f65d Added Files: sql/backends/monet5/bam/Tests/mergetable.SQL.py sql/backends/monet5/bam/Tests/sql/mergetable.sql Modified Files: sql/backends/monet5/bam/Tests/All Branch:

MonetDB: bamloader - Merge with default

2014-10-20 Thread Robin Cijvat
Changeset: 0eef8c674c73 for MonetDB URL: http://dev.monetdb.org/hg/MonetDB?cmd=changeset;node=0eef8c674c73 Added Files: sql/test/BugTracker-2014/Tests/queueError.Bug-3604.sql sql/test/BugTracker-2014/Tests/queueError.Bug-3604.stable.err sql/test/BugTracker-2014/Tests/queueEr

MonetDB: bamloader - Make seq_char also work properly on inserti...

2014-10-20 Thread Robin Cijvat
Changeset: 3ed973da6129 for MonetDB URL: http://dev.monetdb.org/hg/MonetDB?cmd=changeset;node=3ed973da6129 Modified Files: sql/backends/monet5/bam/bam_lib.c Branch: bamloader Log Message: Make seq_char also work properly on insertions/deletions that occur in the CIGAR string. Furthermore,

MonetDB: bamloader - Fixed erroneous function reference

2014-10-20 Thread Robin Cijvat
Changeset: cd4153c81e49 for MonetDB URL: http://dev.monetdb.org/hg/MonetDB?cmd=changeset;node=cd4153c81e49 Modified Files: sql/backends/monet5/bam/bam.mal Branch: bamloader Log Message: Fixed erroneous function reference diffs (10 lines): diff --git a/sql/backends/monet5/bam/bam.mal b/s

MonetDB: bamloader - Added UDF for calculating the character fro...

2014-10-20 Thread Robin Cijvat
Changeset: 84ebb8ecd572 for MonetDB URL: http://dev.monetdb.org/hg/MonetDB?cmd=changeset;node=84ebb8ecd572 Modified Files: sql/backends/monet5/bam/85_bam.sql sql/backends/monet5/bam/bam.mal sql/backends/monet5/bam/bam_lib.c sql/backends/monet5/bam/bam_lib.h Branch: b

MonetDB: bamloader - Merge with default

2014-10-16 Thread Robin Cijvat
Changeset: 437a77bab278 for MonetDB URL: http://dev.monetdb.org/hg/MonetDB?cmd=changeset;node=437a77bab278 Added Files: NT/makelibdef.py buildtools/ChangeLog.Oct2014 clients/ChangeLog.Oct2014 clients/R/MonetDB.R/R/dbi.R clients/R/MonetDB.R/R/dplyr.R c

MonetDB: Oct2014 - Fixed test query 2.4

2014-08-11 Thread Robin Cijvat
Changeset: bcc095a70a73 for MonetDB URL: http://dev.monetdb.org/hg/MonetDB?cmd=changeset;node=bcc095a70a73 Modified Files: sql/backends/monet5/bam/Tests/query2.4.sql sql/backends/monet5/bam/Tests/query2.4.stable.out Branch: Oct2014 Log Message: Fixed test query 2.4 (grafted from 82

MonetDB: default - Fixed test query 2.4

2014-08-11 Thread Robin Cijvat
Changeset: 8228693a6130 for MonetDB URL: http://dev.monetdb.org/hg/MonetDB?cmd=changeset;node=8228693a6130 Modified Files: sql/backends/monet5/bam/Tests/query2.4.sql sql/backends/monet5/bam/Tests/query2.4.stable.out Branch: default Log Message: Fixed test query 2.4 diffs (200 lin

MonetDB: bamloader - Merge with default

2014-07-22 Thread Robin Cijvat
Changeset: bc4ce7f2abb9 for MonetDB URL: http://dev.monetdb.org/hg/MonetDB?cmd=changeset;node=bc4ce7f2abb9 Modified Files: sql/test/BugTracker/Tests/rank_over.SF-1691098.sql sql/test/BugTracker/Tests/rank_over.SF-1691098.stable.out sql/test/BugTracker/Tests/with_only_once.SF

MonetDB: bamloader - Merged local repos with branch

2014-07-22 Thread Robin Cijvat
Changeset: 4194703b0d57 for MonetDB URL: http://dev.monetdb.org/hg/MonetDB?cmd=changeset;node=4194703b0d57 Added Files: sql/test/BugTracker-2014/Tests/oid-table-assert.Bug-3514.sql sql/test/BugTracker-2014/Tests/oid-table-assert.Bug-3514.stable.err sql/test/BugTracker-2014/T

MonetDB: bamloader - Fixed most tests in sql/test, the only ones...

2014-07-22 Thread Robin Cijvat
Changeset: b95d9e5134d0 for MonetDB URL: http://dev.monetdb.org/hg/MonetDB?cmd=changeset;node=b95d9e5134d0 Added Files: sql/test/BugConstraints/Tests/add_constraint_1643522_bam.sql.src sql/test/BugConstraints/Tests/add_constraint_1643522_bam.stable.err sql/test/BugConstraint

MonetDB: bamloader - Extended some more tests

2014-07-21 Thread Robin Cijvat
Changeset: 5d30a783ecdd for MonetDB URL: http://dev.monetdb.org/hg/MonetDB?cmd=changeset;node=5d30a783ecdd Added Files: sql/test/BugTracker-2012/Tests/table_functions_fail_after_restart-0.Bug-3063_bam.sql.src sql/test/BugTracker-2012/Tests/table_functions_fail_after_restart-0.Bug-

MonetDB: bamloader - Adjusted jdbc tests to comply with bamloade...

2014-07-21 Thread Robin Cijvat
Changeset: f4280bc65958 for MonetDB URL: http://dev.monetdb.org/hg/MonetDB?cmd=changeset;node=f4280bc65958 Added Files: sql/jdbc/tests/Tests/Test_Dobjects_bam.SQL.sh sql/jdbc/tests/Tests/Test_Dobjects_bam.stable.err sql/jdbc/tests/Tests/Test_Dobjects_bam.stable.out s

MonetDB: bamloader - Moved creation of static SQL tables from c ...

2014-07-16 Thread Robin Cijvat
Changeset: 99e071e2ea6d for MonetDB URL: http://dev.monetdb.org/hg/MonetDB?cmd=changeset;node=99e071e2ea6d Modified Files: sql/backends/monet5/bam/85_bam.sql sql/backends/monet5/bam/bam_db_interface.c sql/backends/monet5/bam/bam_db_interface.h sql/backends/monet5/bam

MonetDB: bamloader - test.modules is useless after changes in All

2014-07-15 Thread Robin Cijvat
Changeset: 0b8e5a569aa3 for MonetDB URL: http://dev.monetdb.org/hg/MonetDB?cmd=changeset;node=0b8e5a569aa3 Removed Files: sql/backends/monet5/bam/Tests/test.modules Branch: bamloader Log Message: test.modules is useless after changes in All diffs (6 lines): diff --git a/sql/backends/mon

MonetDB: bamloader - Fix stack smashing error by allocating a bi...

2014-07-15 Thread Robin Cijvat
Changeset: 6c764974f9f0 for MonetDB URL: http://dev.monetdb.org/hg/MonetDB?cmd=changeset;node=6c764974f9f0 Modified Files: sql/backends/monet5/bam/bam_loader.c Branch: bamloader Log Message: Fix stack smashing error by allocating a big enough buffer diffs (30 lines): diff --git a/sql/ba

MonetDB: bamloader - Added required role parameter to calls to B...

2014-07-15 Thread Robin Cijvat
Changeset: c8c0548c31cc for MonetDB URL: http://dev.monetdb.org/hg/MonetDB?cmd=changeset;node=c8c0548c31cc Modified Files: sql/backends/monet5/bam/bam_lib.c Branch: bamloader Log Message: Added required role parameter to calls to BATnew diffs (39 lines): diff --git a/sql/backends/monet5

MonetDB: bamloader - Fix file permissions

2014-07-15 Thread Robin Cijvat
Changeset: 5b99954e0ebb for MonetDB URL: http://dev.monetdb.org/hg/MonetDB?cmd=changeset;node=5b99954e0ebb Modified Files: sql/backends/monet5/bam/Tests/All sql/backends/monet5/bam/Tests/query1.1.sql sql/backends/monet5/bam/Tests/query1.2.sql sql/backends/monet5/bam/

MonetDB: bamloader - Fix system absolute paths in test outputs

2014-07-15 Thread Robin Cijvat
Changeset: 9cb7c7c1cf07 for MonetDB URL: http://dev.monetdb.org/hg/MonetDB?cmd=changeset;node=9cb7c7c1cf07 Modified Files: sql/backends/monet5/bam/Tests/bam_loader_file.stable.err sql/backends/monet5/bam/Tests/bam_loader_file.stable.out sql/backends/monet5/bam/Tests/bam_load

MonetDB: bamloader - Merge with default branch

2014-07-15 Thread Robin Cijvat
Changeset: a781f8df7c8f for MonetDB URL: http://dev.monetdb.org/hg/MonetDB?cmd=changeset;node=a781f8df7c8f Added Files: clients/R/MonetDB.R/man/dbTransaction.Rd clients/R/MonetDB.R/man/monetdb_queryinfo.Rd clients/R/MonetDB.R/man/mq.Rd sql/test/BugTracker-2014/Tests/

MonetDB: bamloader - Attach all BAM related SQL functions and pr...

2014-07-14 Thread Robin Cijvat
Changeset: c11e529234ec for MonetDB URL: http://dev.monetdb.org/hg/MonetDB?cmd=changeset;node=c11e529234ec Modified Files: sql/backends/monet5/bam/85_bam.sql sql/backends/monet5/bam/Tests/query1.1.sql sql/backends/monet5/bam/Tests/query1.2.sql sql/backends/monet5/bam

MonetDB: bamloader - Splitted test into many small tests

2014-07-14 Thread Robin Cijvat
Changeset: b3b973d8c3da for MonetDB URL: http://dev.monetdb.org/hg/MonetDB?cmd=changeset;node=b3b973d8c3da Added Files: sql/backends/monet5/bam/Tests/bam.py sql/backends/monet5/bam/Tests/bam_export.SQL.py sql/backends/monet5/bam/Tests/bam_loader_file.SQL.py sql/backe

MonetDB: bamloader - Merge with default branch

2014-07-13 Thread Robin Cijvat
Changeset: 1ce852d1a673 for MonetDB URL: http://dev.monetdb.org/hg/MonetDB?cmd=changeset;node=1ce852d1a673 Added Files: gdk/gdk_firstn.c monetdb5/tests/gdkTests/Tests/firstn.mal monetdb5/tests/gdkTests/Tests/firstn.stable.err monetdb5/tests/gdkTests/Tests/firstn.stab

MonetDB: bamloader - Fixed test

2014-07-10 Thread Robin Cijvat
Changeset: e43b1e7b7612 for MonetDB URL: http://dev.monetdb.org/hg/MonetDB?cmd=changeset;node=e43b1e7b7612 Modified Files: sql/backends/monet5/bam/Tests/test.SQL.py sql/backends/monet5/bam/Tests/test.stable.err sql/backends/monet5/bam/Tests/test.stable.out Branch: bamloader

MonetDB: bamloader - Merge with changes Sjoerd

2014-07-10 Thread Robin Cijvat
Changeset: 350c99a6a6f8 for MonetDB URL: http://dev.monetdb.org/hg/MonetDB?cmd=changeset;node=350c99a6a6f8 Modified Files: configure.ag Branch: bamloader Log Message: Merge with changes Sjoerd ___ checkin-list mailing list checkin-list@monetdb.o

MonetDB: bamloader - Merge with default branch

2014-07-10 Thread Robin Cijvat
Changeset: c0cf13acf65a for MonetDB URL: http://dev.monetdb.org/hg/MonetDB?cmd=changeset;node=c0cf13acf65a Modified Files: MonetDB.spec clients/Tests/SQL-dump.stable.out.32bit configure.ag gdk/gdk_logger.c gdk/gdk_posix.c gdk/gdk_private.h gdk

MonetDB: bamloader - Fixed some memory issues

2014-07-10 Thread Robin Cijvat
Changeset: f123faa305d8 for MonetDB URL: http://dev.monetdb.org/hg/MonetDB?cmd=changeset;node=f123faa305d8 Modified Files: sql/backends/monet5/bam/bam_loader.c sql/backends/monet5/bam/bam_wrapper.h Branch: bamloader Log Message: Fixed some memory issues diffs (100 lines): diff -

MonetDB: bamloader - Improved test greatly

2014-07-03 Thread Robin Cijvat
Changeset: e1dd2e16216e for MonetDB URL: http://dev.monetdb.org/hg/MonetDB?cmd=changeset;node=e1dd2e16216e Removed Files: sql/backends/monet5/bam/Tests/load.sql Modified Files: sql/backends/monet5/bam/Tests/test.SQL.py sql/backends/monet5/bam/Tests/test.stable.err sq

MonetDB: bamloader - Adapted .ag files, MonetDB.spec and debian/...

2014-07-02 Thread Robin Cijvat
Changeset: 43f84e370374 for MonetDB URL: http://dev.monetdb.org/hg/MonetDB?cmd=changeset;node=43f84e370374 Modified Files: MonetDB.spec configure.ag debian/rules sql/backends/monet5/Makefile.ag sql/backends/monet5/bam/Makefile.ag Branch: bamloader Log Message

MonetDB: bamloader - finished bam_export. For this, switched who...

2014-07-02 Thread Robin Cijvat
Changeset: d149e885d77d for MonetDB URL: http://dev.monetdb.org/hg/MonetDB?cmd=changeset;node=d149e885d77d Modified Files: sql/backends/monet5/bam/Makefile.ag sql/backends/monet5/bam/bam_export.c sql/backends/monet5/bam/bam_wrapper.c sql/backends/monet5/bam/bam_wrapp

MonetDB: bamloader - Merge with default branch

2014-07-02 Thread Robin Cijvat
Changeset: 805d4f32d3b6 for MonetDB URL: http://dev.monetdb.org/hg/MonetDB?cmd=changeset;node=805d4f32d3b6 Added Files: geom/BugTracker/Tests/copy_into_mbr.3492.modules geom/BugTracker/Tests/copy_into_mbr.3492.sql geom/BugTracker/Tests/copy_into_mbr.3492.stable.err g

MonetDB: bamloader - Fixed indentation (spaces to tabs) and remo...

2014-07-01 Thread Robin Cijvat
Changeset: aeed76d1d22e for MonetDB URL: http://dev.monetdb.org/hg/MonetDB?cmd=changeset;node=aeed76d1d22e Modified Files: sql/backends/monet5/bam/Makefile.ag sql/backends/monet5/bam/bam_db_interface.c sql/backends/monet5/bam/bam_db_interface.h sql/backends/monet5/ba

MonetDB: bamloader - Finished sam_export and properly catch the ...

2014-04-09 Thread Robin Cijvat
Changeset: 19686dfee569 for MonetDB URL: http://dev.monetdb.org/hg/MonetDB?cmd=changeset;node=19686dfee569 Modified Files: sql/backends/monet5/bam/bam_export.c Branch: bamloader Log Message: Finished sam_export and properly catch the not yet working bam_export diffs (75 lines): diff --g

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