[ccp4bb] Crystals Disappearing Overnight

2014-05-02 Thread dusky dew
Dear All, I am trying to crystallize a protein with Adenosine. My protein is in 20 mM Tris, 300 mM NaCl and the crystals appear in a condition with 5 percent PEG8K, 0.1 M Sodium Cacodylate. The protein is incubated with adenosine for 1/2 hr before setting the drop. The crystals appear right aft

Re: [ccp4bb] Crystals Disappearing Overnight

2014-05-03 Thread dusky dew
1 949 425 1321 Extension 200 > > Fax 1 949 425 1611 > > E-mail b...@hrmail.com > > Web www.hamptonresearch.com > > > > From: CCP4 bulletin board [mailto:CCP4BB@JISCMAIL.AC.UK] On Behalf Of dusky dew > Sent: Friday, May 02, 2014 4:39 AM > To: CCP4BB@JISCMAIL.AC.UK > Subjec

Re: [ccp4bb] Crystals Disappearing Overnight

2014-05-07 Thread dusky dew
phone 1 949 425 1321 Extension 200 > > Fax 1 949 425 1611 > > E-mail b...@hrmail.com > > Web www.hamptonresearch.com > > > > From: CCP4 bulletin board [mailto:CCP4BB@JISCMAIL.AC.UK] On Behalf Of dusky dew > Sent: Saturday, May 03, 2014 1:29 AM > To: CCP4BB@JISCMAIL.A

[ccp4bb] cannot reproduce crystals

2014-07-14 Thread dusky dew
Dear all, I am trying to reproduce some protein crystals. The protein I am getting after cutting the his tag is very pure. I am using the reported protein concentration. The cofactor and EDTA needs to be added externally. The condition has calcium acetate, peg 4k and sodium acetate buffer. Unfortun

[ccp4bb] Problem in molecular replacement

2014-07-24 Thread dusky dew
DEAR ALL I am trying to solve the structure of a protein DNA complex with molecular replacement. The resolution in about 2.5 angstrom. The spacegroup is P21. The search model has about 50% identity and is a dimer of a dimer. The problem is the unit cell is huge and so the number of molecules in as

Re: [ccp4bb] Problem in molecular replacement

2014-07-24 Thread dusky dew
One tips, sometimes the DNA could be organised in "infinite Helix" in the crystal, you can try to use DNA 2 times longer than you expect especially if your DNA molecules has over-hang. > > Nicolas > ____ > De : CCP4 bulletin board [CCP4BB@

[ccp4bb] composite omit map

2014-08-26 Thread dusky dew
Can you people please tell me how to calculate a composite omit map in ccp4? Thanks Madhu