[ccp4bb] R-merge is too high !!

2018-09-28 Thread Zhang Foggy
Dear All, Sorry for the off-topic. I recently collected a set of data. The diffraction spots are extremely sharp. However, When I used HKL3000 to scale it, I get a final resolution at 3.1A with overall R-merge ~0.54 (R-merge in the highest 3.2A-3.1A shell: 1.59). Then I solve the structure with f

Re: [ccp4bb] R-merge is too high !!

2018-10-16 Thread Zhang Foggy
ou run it through there… though i am not the specialist > to talk to > on what XDS can do for corrections…. > > > Best, > Tommi > > > On 29 Sep 2018, at 10:58, Zhang Foggy > wrote: > > Dear All, > > Thanks for your kindly comments. Here are the summary a

[ccp4bb] Error information during opening ccp4 in mac

2019-07-01 Thread Zhang Foggy
Dear all, I got such kind of error information during opening ccp4 in mac. Can anyone tell me how to fix it ? Thanks a lot! Application initialization failed: couldn't connect to display "/private/tmp/com.apple.launchd.hH7rs61iI7/org.macosforge.xquartz:0" Error in startup script: can't read "tk_

[ccp4bb] Autobuild in specific area

2014-09-13 Thread Zhang Foggy
Hi, All, I am trying to use Autobuild to build a protein-protein complex model. I obtained partial phase solution (protein-A) through MR, and can see some density of protein-B near protein-A. I would like to use Autobuild to build protein-B model into this area. I load data file, initial density m