Re: [ccp4bb] Who invented PDB format?

2013-01-06 Thread Teri Arman
Fractional Coordiantes to Orthogonal Coordinates and Vice Versa Hi, I need help, how can I make coordiates of 100 of PDBs of different space groups to fractional coordiantes and vice versa. I do not find CCP4 do it? A program of fortran or C codes with possible suggestion may be helpful. Thank yo

Re: [ccp4bb] Who invented PDB format?

2013-01-10 Thread Teri Arman
Hi, I appreciate If anybody help me couple of things as follows. (a1) how multiple PDBs (of same or different space groups) can be brought into one frame of coordinates, when dealing with many PDBs? (a2) how does one get scatter plot? (b) how easily can symmetry related units of original PDB (wi

Re: [ccp4bb] Who invented PDB format?

2013-01-10 Thread Teri Arman
Dear Dr. Frolow Thank you for your mail. I stated again, and hope it is clear now. TA. On Fri, Jan 11, 2013 at 4:11 AM, Felix Frolow wrote: > > On Jan 10, 2013, at 18:27 , Teri Arman wrote: > > Hi, I appreciate If anybody help me couple of things as follows. > > > > (a

[ccp4bb] R-factors of various kind

2013-01-17 Thread Teri Arman
Hi, it would be nice if you highlight different type of R-factors used in the literature. I like to understand various kind of R-Factors, their mathematical formula, and relations among them. Thank you. Teri

Re: [ccp4bb] R-factors of various kind

2013-01-21 Thread Teri Arman
(aka R_rim)). > > Best, > Tim > > On 01/18/2013 05:07 AM, Teri Arman wrote: > > Hi, it would be nice if you highlight different type of R-factors > > used in the literature. I like to understand various kind of > > R-Factors, their mathematical formula, and r