Re: crystal friendly solvents that are useful for dissolving hydrophobic small molecules?

2007-01-22 Thread Ohren, Jeffrey
Hi Todd, You could try dissolving your compound directly into your PEG4000 precipitant. Alternatively, you could try other low molecular weight PEGs. Good luck, Jeff From: CCP4 bulletin board [mailto:[EMAIL PROTECTED] On Behalf Of Green, Todd Sent: Mon

Re: advice

2007-01-22 Thread Ohren, Jeffrey
A follow up to this (for what it's worth) is that it's sometimes easier to solve a structure by MR from a homologous structure determined by experimental phases than it is to solve the initial structure by SeMet, MIR, etc. An example is the case of the structure determination of the second isoform

Re: [ccp4bb] References for ligand flipping

2008-02-19 Thread Ohren, Jeffrey
Kendall, All, One classic example that comes to mind is the multiple binding modes that have been structurally described for the drug Gleevec AKA Imatinib. Gleevec or closely related analogs have been shown to bind to the kinases Abl (1) and c-Kit (2) in a Phe-out conformation of the conserved

Re: [ccp4bb] crystallisation and mosaicity

2008-06-04 Thread Ohren, Jeffrey
Could it be that evaporation on the way from the microscope to the cold stream increases the effective cryo concentration as well as causing a beneficial dehydration effect? There are quite a few publications that have carefully evaluated optimizing cryo cooling. Check out Elspeth Garman's many e

Re: [ccp4bb] Cryoprotection in > 3M ammonium sulfate

2009-08-19 Thread Ohren, Jeffrey
Dear Brenda, I'd suggest using a mixture of 75% Paratone-N oil with 25% light, white mineral oil. Mix the two thoroughly with a positive displacement pipette then add a small amount next to the mother liquor (ML) drop. Remove a crystal from the ML using a matched cryo loop (the smaller the better)