Re: [ccp4bb] List of 3-letter codes of modified amino acids

2024-06-24 Thread Marcus Bage
Hi everyone, Last year wwPDB standardised the backbone atom names for all residues that are part of a polypeptide sequence within the PDB archive. A full list of all chemical components affected can be found at: github.com/wwPDB/backbone-extension/tree/master/data/ccds This is a list of all mo

Re: [ccp4bb] List of 3-letter codes of modified amino acids

2024-06-24 Thread Marcus Bage
the PDB consistent through all entries in such a case?    Frances Bernstein On 2024-06-24 11:03, Marcus Bage wrote: Hi everyone, Last year wwPDB standardised the backbone atom names for all residues that are part of a polypeptide sequence within the PDB archive. A full list of

Re: [ccp4bb] List of 3-letter codes of modified amino acids

2024-06-24 Thread Marcus Bage
group?  Is the PDB consistent through all entries in such a case?    Frances Bernstein On 2024-06-24 11:03, Marcus Bage wrote: Hi everyone, Last year wwPDB standardised the backbone atom names for all residues that are part of a polypeptide sequence within the PDB archive. A full

Re: [ccp4bb] depositing a posttranslational modification

2024-10-16 Thread Marcus Bage
I hope this helps answer your questions. Let me know if anything remains unclear. Kind regards, Marcus Bage On 15/10/2024 16:19, Palm, Gottfried wrote: Dear all,   I have a couple of questions regarding deposition of a structure with a posttranslational modification. 1. I understand, th