[ccp4bb] Hydrophobic interactions

Hi Everyone I have to calculate hydrophobic interactions in pdb files. Is any server available for this type of calculation? Thanks in advance Amit

[ccp4bb] SAXS workshop

Hello If I am not wrong, there was one posting related with SASX workshop where we can also bring own samples. Does someone have that information? Please send me the link. Thanks a lot Amit

[ccp4bb] nmr blog

Is any NMR blog available for discussion? Amit Luthra, Ph.D. Post-Doctoral Fellow The Radolf Laboratory Department of Medicine University of Connecticut Health Center [e] aut...@uchc.edu [p] 860/ 679 - 8390 [w] http://spirocheteresearch.uchc.edu/

[ccp4bb] NMR blog

Thanks to everyone for NMR discussion blogs. Amit Luthra, Ph.D. Post-Doctoral Fellow The Radolf Laboratory Department of Medicine University of Connecticut Health Center [e] aut...@uchc.edu [p] 860/ 679 - 8390 [w] http://spirocheteresearch.uchc.edu/

Re: [ccp4bb] mutation and minimization

Hi If you are familiar with turbo-frodo, you can use it for mutagenesis and refinement . Just go inside the editing menu, replace the residue, save the file and REFINE the residue. You can also select the stretch of residues by picking the first and last residues so you will get the refinemen

[ccp4bb] B factor

Hey all, I would like to make one ribbon diagram of the structure showing the B factor in different colors (contour levels). I am using pymol but it is not representing the perfect contour level of B factor. Is any other program where I can change the color according to B factor? Thanks Ami

Re: [ccp4bb] unidentified density

I think it's MPD. I have also observed in my crystals. Amit Luthra, Ph.D. Post-Doctoral Fellow The Radolf Laboratory Department of Medicine University of Connecticut Health Center [e] alut...@uchc.edu [p] 860/ 679 - 8390 From: CCP4 bu