Re: [ccp4bb] PyVol on Apple Music Series?

2024-11-12 Thread Nikolas
Hi Shawn, I’m running it (v. 1.7.8) on a MacBook Pro M3 with no issues, except the known ones after v 1.3 such as representing as a mesh/palette conflicts. The only nuance I usually have upon installation is scavenging for the MSMS file and then trying to place it in the right place. Did you upda

Re: [ccp4bb] PyVol on Apple Music Series?

2024-11-12 Thread Shawn Rumrill
Many thanks to Nikolas Capra for locating a working msms installer and providing guidance! For anyone interested in the solution, please see below: After you install the PyMol PyVol plugin... 1. The installation will say it is missing msms. a. To install msms, download the installer from

Re: [ccp4bb] PyVol on Apple Music Series?

2024-11-12 Thread Nikolas
I’m using “msms_x86_64Darwin_2.6.1” but don’t remember where I downloaded it from. If I’m not mistaken (but memory doesn’t serve well at the moment), this was also in my Intel MB pro, and worked anyway. Cheers, Nikolas On Tue, 12 Nov 2024 at 13:06, Nikolas wrote: > Hi Shawn, > > I’m running it

[ccp4bb] CBMS Lecture Series - Nonato - 20 November 2024

2024-11-12 Thread Stojanoff, Vivian
You are cordially invited to join the Center for Biomolecular Structure Lecture Series ……….. REMINDER Maria Cristina (Cristy) Nonato Pharmaceutical Sciences University of Sao Paulo - Campus Ribeirão Preto WEDNESDAY, November 20, 13:30 (EST) "Fragment screening at CRAFT: Center for the Resea

[ccp4bb] NYSBC 2025 Tomography short course - NYC, USA

2024-11-12 Thread Ed Eng
Dear all, Save the date. We are pleased to announce we will be offering our biennial cryoEM short course in tomography March 31 to April 4, 2025. This 1-week course is focused on the theory and practice of cryo-ET methods. We will step through each stage of the cryo-ET workflow (specimen prepar

[ccp4bb] Postdoc position at the Mchaourab Lab

2024-11-12 Thread Karakas, Erkan
An NIH-supported postdoctoral fellowship is currently available in the Mchaourab laboratory at Vanderbilt University in Nashville, TN. We are a highly interdisciplinary group with interest ranging from proteostasis in zebrafish to the conformational dynamics of active transporters. While histori

[ccp4bb] Jeffamine dictionary

2024-11-12 Thread Ben Bax
Dear CCP4BB, I am refining a structure crystallised in the presence of Jeffamine 600. The CCP4 dictionary for Jeffamine says all nine chiral atoms have a defined chirality. Is this correct or not? Thanks, Ben Bax loop_ _chem_comp_chir.comp_id _chem_comp_chir.id _chem_comp_chir.atom_id_cen

[ccp4bb] PyVol on Apple Music Series?

2024-11-12 Thread Shawn Rumrill
Hi All, Perhaps off-topic, but this is a knowledgeable group, so I thought I'd ask... Has anyone successfully installed and run PyVol (the PyMol plugin) on an M series Mac? I am running into the error "Bad CPU type in executable: 'msms'" when I try to run the plugin. I assume this is because m