We still have openings available for the MAD station F2 during the
month of April. There have been a number of recent improvements to
F2, so if you haven't used the station in a while, you might want to
check it out. Microbeam optics are available for this line on
request. Interested users
Hi,
Does anyone have ready made script to convert 3D co-ordinate from x,y,z to
y,x,-z+2/3. I need to create a new pdb file from existing one. I am using
ubuntu linux with tcshell ans also mac with bash shell.
Thank you in advance for the script.
RD
-
I would like to announce a PhD position in Protein crystallography and
Cell Biology, on a project entitled "Structure/function studies of fungal
lectins and bacterial toxins". The project is part of an emerging top-tier
research environment, promoted by the University of Oslo. The main goal of
this
Hi,
does it have to be a script? pdbset from ccp4 and moleman(2) by G.
Kleywegt should be able to carry out this transformation.
I think, the rotation matrix would be
0 1 0
1 0 0
0 0 -1
and the translational vector (0 0 2/3).
So in pdbset, the command would probably be
transform fractional
The RCSB Protein Data Bank at the University of California San Diego has an
open position for a junior Scientific Software Developer:
http://joblink.ucsd.edu/bulletin/job.html?cat=new&job_id=45537
Please contact Dr. Peter Rose at [EMAIL PROTECTED] or Dr. Phil Bourne at
[EMAIL PROTECTED] about thi
The Berkeley Center for Structural Biology (BCSB) is pleased to
announce a new Collaborative Crystallography Pilot Program (CC) at the Advanced
Light Source in Berkeley. Through this program, scientists are able to send
protein crystals to BCSB staff researchers for data collection and analysis.
Hi,
How I can change names of many files keeping the extension same. My files are
like this
1105 A0176.osc
1105 A0177.osc
1105 A0178.osc
1105 A0179.osc
1105 A0180.osc
I want to change them as
A0176.osc
A0177.osc
A0178.osc
A0179.osc
A0180.osc
I am using ubuntu linux.
Thanks...
RD
Raja Dey,
Install zsh.
Then invoke it.
Then issue:
autoload -U zmv
alias mmv='noglob zmv -W'
Then you are ready for some fun:
mmv 1105\ A*.osc A*.osc
Then if you decide to make your default shell zsh, you can put that in
your .zshrc file and all you have to remember in the future is mmv
Raja Dey
I don't know where this comes from, but its called rename-alot. Its a
perl script. I'm guessing "Larry" is Larry Wall, but who knows. chmod a
+x it and then put it in your path (~/bin)
You run it like this
rename-alot 's/1105 A/A/' *.osc
The above will change all files that look like this: "