Re: [ccp4bb] removal of sulfate ion from the active site

2007-05-25 Thread Marius Schmidt
Before a buffer exchange I would increase ligand concentration, if possible. Just get the binding constant and the concentration of the protein in the crystal and CALCULATE the ligand concentration which is needed to achieve 99.9 % saturation. With moderate binding this will quickly bring you to th

Re: [ccp4bb] removal of sulfate ion from the active site

2007-05-25 Thread R.M. Garavito
Simon, This is not an unusual situation with sulfate, and, yes, sulfate often occupies phosphate binding sites (particularly when you're work with 1-3 molar concentration of ammonium sulfate). The simplest way to remove sulfate from the crystal is to transfer to high concentrations of ci

Re: [ccp4bb] removal of sulfate ion from the active site

2007-05-25 Thread Dirk Kostrewa
Hi Yue Li, are you sure that it's the sulfate that competes with the inhibitor binding, say, from enzymatic test? It could be, but it is known that sulfates and phosphates usually prefer different binding sites ... Best regards, Dirk. Yue Li wrote: > Hi all, > > I have crystals of the apo enz