Re: [ccp4bb] Out of topic: Plot Ligand-protein interactions

2012-01-20 Thread Tom Oldfield
Wenhe There is a ligand environment viewer at the URL below that plots environments of ligands in various view types. At the moment is only works on existing structures since the ligands have to be correctly typed with correct dictionaries. This has a number of export formats. http://www.eb

Re: [ccp4bb] Out of topic: Plot Ligand-protein interactions

2012-01-20 Thread krish
Dear Wenhe, You don't need any skills to use Ligplot. Only thing you have to give is the "residue number" of the ligand or the small molecule you are interested in the command line. There are other commercial software but i don't know whether they are of any interest to you ! MOE or MAESTRO al