Thomas,
The Areaimol program within the CCP4 suite should do what you're looking
for: http://www.ccp4.ac.uk/html/areaimol.html Although its a calculation of
surface accessability, you can delete sections of your protein to get at the
buried area between two sections of your protein.
Cheers, Jim
Hello all
can any one suggest any server or tool which can calculate the burried
surface area between the domains of the same monomer? PISA calculates the
interfacial surace area between the monomer or oligomer. Can areamol
calculate it?
Thanks in advance
Thomas
