Re: [ccp4bb] search for similar complex structures (help-20620)

2024-01-29 Thread Rachel Kramer Green
Dear Norbert, The structure search functionality at RCSB.org should help find AB complexes similar to yours: 1. Go to https://www.rcsb.org/search/advanced 2. In the "Structure Similarity" section, select  "File upload" (using the pull-down menu that has "Entry ID" as the default) 3. Upload

[ccp4bb] search for similar complex structures

2024-01-29 Thread Norbert Straeter
Dear all, I have a heterodimeric complex AB and want to know if there are similar complexes between homologs of A and homologs of B or even any complex structures between such homologs. For the latter task, I could search for homologs of A and homologs of B by advanced PDB search or DALI etc.