Re: [ccp4bb] rescuing crashing-out protein eluted from Nickel column

2008-02-19 Thread Charlie Bond
Hi Jacob, Two points which I don't think others have mentioned: Have you checked the pH of your imidazole (or pHed the solution before elution)? It may be that the imidazole has driven up your pH, causing protein to crash out. You can add various things to fraction tubes prior to elution so t

Re: [ccp4bb] rescuing crashing-out protein eluted from Nickel column

2008-02-15 Thread Jacob Wong
Dear all, thank you so much for all the invaluable tips that were delivered faster than FedEx (and sorry for not being able to reply to individual emails). My problem was resolved by adding EDTA (to about 5 mM), spinning down at 15K for 10min to get rid of precipitation (I did have some even with t

Re: [ccp4bb] rescuing crashing-out protein eluted from Nickel column

2008-02-15 Thread Chun Luo
riday, February 15, 2008 9:36 AM To: CCP4BB@JISCMAIL.AC.UK Subject: Re: [ccp4bb] rescuing crashing-out protein eluted from Nickel column Hi, I also encounterd the same kind of problem with my protein. I noticed that the protein eluted from Ni-NTA with 150mM imidazole or 300mM didn't behave i

Re: [ccp4bb] rescuing crashing-out protein eluted from Nickel column

2008-02-15 Thread R.M. Garavito
Jacob, This is not a uncommon problem with Ni-chelation chromatography (on Ni-NTA or Talon) with soluble and membrane proteins. In most of my experiences, it is a salt problem (i.e., too little), but hydrophobicity issues abound, as well. On a pilot scale, just add any of the suggested a

Re: [ccp4bb] rescuing crashing-out protein eluted from Nickel column

2008-02-15 Thread Mathews, Irimpan
this compound was very cheap). best wishes, Mathews From: CCP4 bulletin board [mailto:[EMAIL PROTECTED] On Behalf Of Jacob Wong Sent: Thursday, February 14, 2008 4:26 PM To: CCP4BB@JISCMAIL.AC.UK Subject: [ccp4bb] rescuing crashing-out protein eluted from Nickel

Re: [ccp4bb] rescuing crashing-out protein eluted from Nickel column

2008-02-15 Thread Valerie Guillet
cuing crashing-out protein eluted from Nickel column Dear all, I just ran into this problem and would like to see if I could get some helpful tips before my protein completely crashes out. I have a protein as 6His fusion and it remained bound to the Ni resin with 40 mM Imidazole wash (added to

Re: [ccp4bb] rescuing crashing-out protein eluted from Nickel column

2008-02-15 Thread Artem Evdokimov
Artem _ From: CCP4 bulletin board [mailto:[EMAIL PROTECTED] On Behalf Of Jacob Wong Sent: Thursday, February 14, 2008 7:26 PM To: CCP4BB@JISCMAIL.AC.UK Subject: [ccp4bb] rescuing crashing-out protein eluted from Nickel column Dear all, I just ran into this problem and would like to see if I

Re: [ccp4bb] rescuing crashing-out protein eluted from Nickel column

2008-02-15 Thread Tommi Kajander
first aid panic rescue might be to quickly add more salt. (e.g. in couple of steps to 0.5 M-1 M NaCl and see if it clears up). then add EDTA/or/and dialyse. (have to get teh salt out probably...) the Ni-ions leaking out are a likely cause. among others. tommi Quoting José Trincão <[EMAIL P

Re: [ccp4bb] rescuing crashing-out protein eluted from Nickel column

2008-02-15 Thread José Trincão
Hi Jacob, try adding a bit of edta (1mM) to remove any Ni that might come off the column. You could also add some DTT or bME to keep cysteines reduced (careful, add only after the edta!). In my experience the gradient did not work very weel because the protein with have a lot of impurities. Yo

Re: [ccp4bb] rescuing crashing-out protein eluted from Nickel column

2008-02-14 Thread Jacob Wong
Thank you all for the quick replies - I'm trying many of the tips in small batches and would send out a feedback as soon as appropriate, gratefully, - J.J. On 2/14/08, Jacob Wong <[EMAIL PROTECTED]> wrote: > > Dear all, > > I just ran into this problem and would like to see if I could get some > h

Re: [ccp4bb] rescuing crashing-out protein eluted from Nickel column

2008-02-14 Thread Chun Luo
M To: CCP4BB@JISCMAIL.AC.UK Subject: [ccp4bb] rescuing crashing-out protein eluted from Nickel column Dear all, I just ran into this problem and would like to see if I could get some helpful tips before my protein completely crashes out. I have a protein as 6His fusion and it remained bound to

[ccp4bb] rescuing crashing-out protein eluted from Nickel column

2008-02-14 Thread Jacob Wong
Dear all, I just ran into this problem and would like to see if I could get some helpful tips before my protein completely crashes out. I have a protein as 6His fusion and it remained bound to the Ni resin with 40 mM Imidazole wash (added to 1XPBS) but then was eluted off with 200 mM (added to 1XP