Dear All,
Thanks for the suggestions. I will work on them.I had not worked on the
modified residues, so thanks for all the valuable suggestions.
RegardsRajesh
Date: Thu, 22 Mar 2012 10:15:55 +
From: ga...@mrc-lmb.cam.ac.uk
Subject: Re: [ccp4bb] refining phosphorylated residues
To: CCP4BB
UK] On Behalf Of Rajesh
> kumar
> Sent: Thursday, 22 March 2012 12:00 p.m.
> To: CCP4BB@JISCMAIL.AC.UK
> Subject: [ccp4bb] refining phosphorylated residues
>
> Dear All,
>
> I have a structure of a protein and peptide complex, in which peptide has
> modified resid
Have you checked the dictionary cif calls them L-peptide?
Eleanor
The header should look like this..
# data_comp_list loop_ _chem_comp.id _chem_comp.three_letter_code
_chem_comp.name _chem_comp.group _chem_comp.number_atoms_all
_chem_comp.number_atoms_nh _chem_comp.desc_level ALA ALA 'ALANINE
3:54 AM
To: CCP4BB@JISCMAIL.AC.UK
Subject: Re: [ccp4bb] refining phosphorylated residues
Hi Joel, thanks for the reply. It's not phospho group but the whole residue get disconnected. In coot if I do refinement they get disconnected.
Thanks
Rajesh
Sent from my iPhone
On Mar 21, 2012,
mailto:CCP4BB@JISCMAIL.AC.UK] On Behalf Of Rajesh
> kumar
> Sent: Thursday, 22 March 2012 12:00 p.m.
> To: CCP4BB@JISCMAIL.AC.UK
> Subject: [ccp4bb] refining phosphorylated residues
>
> Dear All,
>
> I have a structure of a protein and peptide complex, in which peptide
Of Rajesh
kumar
Sent: Thursday, 22 March 2012 12:00 p.m.
To: CCP4BB@JISCMAIL.AC.UK
Subject: [ccp4bb] refining phosphorylated residues
Dear All,
I have a structure of a protein and peptide complex, in which peptide has
modified residues ( phosphoserine and phosphothreonine).
During refinement
Subject: [ccp4bb] refining phosphorylated residues
Dear All,
I have a structure of a protein and peptide complex, in which peptide has
modified residues ( phosphoserine and phosphothreonine).
During refinement these both gets disconnected with adjacent residues and its
hard to connect them
Dear All,
I have a structure of a protein and peptide complex, in which peptide has
modified residues ( phosphoserine and phosphothreonine). During refinement
these both gets disconnected with adjacent residues and its hard to connect
them.Could you please suggest me some options.
ThanksRajesh
